RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 C2orf42Q9NWW7 574 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 CNTN3Q9P232 1028 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 ANGPTL2Q9UKU9 493 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 CACNA1GO43497 2377 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 CEP295Q9C0D2 2601 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 TRIP11Q15643 1979 aa10.92□□□□□ -0.66
CALCOCO2-227ENST00000575560 SLC38A8A6NNN8 435 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 SPECC1L-ADORA2AF8WAN1 911 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 ABLIM1O14639 778 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 VNN2O95498 520 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 MCF2P10911 925 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 PROZP22891 400 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 HOXC13P31276 330 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 NPTX2P47972 431 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 SOX9P48436 509 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 KPNA1P52294 538 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 CCINQ13939 588 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 HEATR6Q6AI08 1181 aaKnown RBP10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 ZNF280DQ6N043 979 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 Q6ZS52 159 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 WDR5BQ86VZ2 330 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 RALGPS2Q86X27 583 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 TMC8Q8IU68 726 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 YAF2Q8IY57 180 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 NECAB1Q8N987 351 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 APPL2Q8NEU8 664 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 ERMNQ8TAM6 284 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 DDX12PQ92771 950 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 ACAP3Q96P50 834 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 NUB1Q9Y5A7 615 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 TICRRQ7Z2Z1 1910 aa10.91□□□□□ -0.66
CALCOCO2-227ENST00000575560 A0A1W2PRU2 124 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 M0QZQ0 153 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 OAZ2O95190 189 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ZNF806P0C7X5 589 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 CTHP32929 405 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 RAP1GAPP47736 663 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ANKRD1Q15327 319 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ME3Q16798 604 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 SLC10A6Q3KNW5 377 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ZNF568Q3ZCX4 644 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 IL31Q6EBC2 164 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 NSUN7Q8NE18 718 aaKnown RBP10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 GTF3C6Q969F1 213 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 LOXL4Q96JB6 756 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 TARS2Q9BW92 718 aaKnown RBP10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 MRPL4Q9BYD3 311 aaKnown RBP10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 BHMT2Q9H2M3 363 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 CRISPLD1Q9H336 500 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 SLITRK6Q9H5Y7 841 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 RXFP3Q9NSD7 469 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 ARHGAP28Q9P2N2 729 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 YIPF1Q9Y548 306 aa10.9□□□□□ -0.66
CALCOCO2-227ENST00000575560 PHLPP2Q6ZVD8 1323 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 AXIN1O15169 862 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 OR52Z1P0C646 297 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 CPB1P15086 417 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 MCM4P33991 863 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 PEX3P56589 373 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 DUSP4Q13115 394 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 GPR17Q13304 367 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 SF3A2Q15428 464 aaKnown RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 STXBP5Q5T5C0 1151 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 MPZL3Q6UWV2 235 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 CEP68Q76N32 757 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 DAW1Q8N136 415 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 ZBTB45Q96K62 511 aaPredicted RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 OBP2AQ9NY56 170 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 GTSE1Q9NYZ3 720 aa10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 RBM19Q9Y4C8 960 aaKnown RBP10.89□□□□□ -0.67
CALCOCO2-227ENST00000575560 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 EXTL3O43909 919 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 JAK2O60674 1132 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 EPN2O95208 641 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 LARGE1O95461 756 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 WEE1P30291 646 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 LRPAP1P30533 357 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 CCT6AP40227 531 aaKnown RBP10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 AARSP49588 968 aaKnown RBP eCLIP10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 EPHB3P54753 998 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 PLD1Q13393 1074 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 TRIM29Q14134 588 aa10.88□□□□□ -0.67
CALCOCO2-227ENST00000575560 PDIA5Q14554 519 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms