RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 ASS1P00966 412 aaKnown RBP19.57■□□□□ 0.72
CCDC40-213ENST00000574933 SOD2P04179 222 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 KRT19P08727 400 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 MYO1EQ12965 1108 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 GPM6BQ13491 265 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 TRPC3Q13507 836 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 SV2CQ496J9 727 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 TIGD5Q53EQ6 642 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 HSP90AA4PQ58FG1 418 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 APTXQ7Z2E3 356 aaKnown RBP19.57■□□□□ 0.72
CCDC40-213ENST00000574933 LIMS2Q7Z4I7 341 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 TAS1R2Q8TE23 839 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 ARNTL2Q8WYA1 636 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 HPDLQ96IR7 371 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 HERC2P3Q9BVR0 1158 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 CHST7Q9NS84 486 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 PUF60Q9UHX1 559 aaKnown RBP19.57■□□□□ 0.72
CCDC40-213ENST00000574933 MTUS1Q9ULD2 1270 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
CCDC40-213ENST00000574933 NUB1Q9Y5A7 615 aa19.57■□□□□ 0.72
CCDC40-213ENST00000574933 KPNA7A9QM74 516 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 SYN3O14994 580 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 LPXNO60711 386 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 FGFR3P22607 806 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 BRCC3P46736 316 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 MYL6P60660 151 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 SGSM1Q2NKQ1 1148 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 VWA3BQ502W6 1294 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 ZNF697Q5TEC3 545 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-213ENST00000574933 ANKRD20A12PQ8NF67 263 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 HASPINQ8TF76 798 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 FAXDC2Q96IV6 333 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 NDST4Q9H3R1 872 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 CERS4Q9HA82 394 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 RAB20Q9NX57 234 aa19.56■□□□□ 0.72
CCDC40-213ENST00000574933 ARHGEF37A1IGU5 675 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 GRM6O15303 877 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 FAM163BP0C2L3 166 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 ATP1A3P13637 1013 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 TYMPP19971 482 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
CCDC40-213ENST00000574933 PIK3CAP42336 1068 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 MYL7Q01449 175 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 CAMK1Q14012 370 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 CREBRFQ8IUR6 639 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 LMO3Q8TAP4 145 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 POF1BQ8WVV4 589 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 SEMA4DQ92854 862 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 SENP8Q96LD8 212 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 ZBP1Q9H171 429 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 ALG13Q9NP73 1137 aaKnown RBP19.55■□□□□ 0.72
CCDC40-213ENST00000574933 PCDHB8Q9UN66 801 aa19.55■□□□□ 0.72
CCDC40-213ENST00000574933 GOLGA6L19H0YKK7 550 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 FSCN2O14926 492 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 CYP11A1P05108 521 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 CTSAP10619 480 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 DNAJB1P25685 340 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 COPB1P53618 953 aaKnown RBP19.54■□□□□ 0.72
CCDC40-213ENST00000574933 TPM4P67936 248 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 DSG1Q02413 1049 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 CETN1Q12798 172 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 USP41Q3LFD5 358 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 PDE12Q6L8Q7 609 aaKnown RBP19.54■□□□□ 0.72
CCDC40-213ENST00000574933 DPH6Q7L8W6 267 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 VPS52Q8N1B4 723 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 SPATA18Q8TC71 538 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 IRAK3Q9Y616 596 aa19.54■□□□□ 0.72
CCDC40-213ENST00000574933 LILRB3O75022 631 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 POU3F3P20264 500 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-213ENST00000574933 FXR1P51114 621 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC40-213ENST00000574933 MRPL58Q14197 206 aaKnown RBP19.53■□□□□ 0.72
CCDC40-213ENST00000574933 ZNF699Q32M78 642 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 FAM171A1Q5VUB5 890 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 KIAA0319Q5VV43 1072 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 DSTYKQ6XUX3 929 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 TAS1R1Q7RTX1 841 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 GAS2L3Q86XJ1 694 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 TOP6BLQ8N6T0 577 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 GDPD5Q8WTR4 605 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 TLR9Q9NR96 1032 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 TAB2Q9NYJ8 693 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 LMCD1Q9NZU5 365 aa19.53■□□□□ 0.72
CCDC40-213ENST00000574933 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 I3L4J1 428 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 CYB561D2O14569 222 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 LRRN2O75325 713 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 TPM2P07951 284 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
CCDC40-213ENST00000574933 GRIN2CQ14957 1233 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 ZNF667Q5HYK9 610 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 TMEM86AQ8N2M4 240 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 EHBP1Q8NDI1 1231 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 APPL2Q8NEU8 664 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 PIK3R5Q8WYR1 880 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 IMPG2Q9BZV3 1241 aa19.52■□□□□ 0.72
CCDC40-213ENST00000574933 VPS16Q9H269 839 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms