RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TRIP12Q14669 1992 aaPredicted RBP30.4■■■□□ 2.46
CTDNEP1-210ENST00000574322 PAFAH1B1P43034 410 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 ASPAP45381 313 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 CFAP221Q4G0U5 840 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 C11orf63Q6NUN7 778 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 PPP1R2P3Q6NXS1 205 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 NOTUMQ6P988 496 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 ARGLU1Q9NWB6 273 aaPredicted RBP30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 RAB21Q9UL25 225 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 DERAQ9Y315 318 aa30.39■■■□□ 2.46
CTDNEP1-210ENST00000574322 FGFR4P22455 802 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 GNA15P30679 374 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 YWHAEP62258 255 aaKnown RBP30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 CENPCQ03188 943 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 GNASQ5JWF2 1037 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 TAF2Q6P1X5 1199 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 MMGT1Q8N4V1 131 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 CCDC94Q9BW85 323 aaPredicted RBP30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 EPC1Q9H2F5 836 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 SPC25Q9HBM1 224 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 UVRAGQ9P2Y5 699 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 AMFRQ9UKV5 643 aa30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 PACSIN2Q9UNF0 486 aaPredicted RBP30.39■■■□□ 2.45
CTDNEP1-210ENST00000574322 CITO14578 2027 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 RALGAPA2Q2PPJ7 1873 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 CRYBB1P53674 252 aaPredicted RBP30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 ZNF200P98182 395 aaPredicted RBP30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 TMEM132DQ14C87 1099 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 SNX17Q15036 470 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 COL13A1Q5TAT6 717 aaPredicted RBP30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 CCDC181Q5TID7 509 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 PPP1R13LQ8WUF5 828 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 PSMB7Q99436 277 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 BCO2Q9BYV7 579 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 GOLPH3Q9H4A6 298 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 PAK6Q9NQU5 681 aaPredicted RBP30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 CISHQ9NSE2 258 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 CTTNBP2NLQ9P2B4 639 aa30.38■■■□□ 2.45
CTDNEP1-210ENST00000574322 STAU1O95793 577 aaKnown RBP30.37■■■□□ 2.45
CTDNEP1-210ENST00000574322 MYBL1P10243 752 aa30.37■■■□□ 2.45
CTDNEP1-210ENST00000574322 SPATA4Q8NEY3 305 aa30.37■■■□□ 2.45
CTDNEP1-210ENST00000574322 TRIM11Q96F44 468 aa30.37■■■□□ 2.45
CTDNEP1-210ENST00000574322 AVENQ9NQS1 362 aaPredicted RBP30.37■■■□□ 2.45
CTDNEP1-210ENST00000574322 FAM124BQ9H5Z6 455 aaPredicted RBP30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 ITGA11Q9UKX5 1188 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 GINS2Q9Y248 185 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 NPTXRO95502 500 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 CALCAP01258 141 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 CLCN6P51797 869 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 ZNF667Q5HYK9 610 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 MCOLN2Q8IZK6 566 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 VCPIP1Q96JH7 1222 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 DEFB118Q96PH6 123 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 XPNPEP3Q9NQH7 507 aa30.36■■■□□ 2.45
CTDNEP1-210ENST00000574322 ADAMTS4O75173 837 aa30.35■■■□□ 2.45
CTDNEP1-210ENST00000574322 LHX8Q68G74 356 aa30.35■■■□□ 2.45
CTDNEP1-210ENST00000574322 TMEM40Q8WWA1 233 aa30.35■■■□□ 2.45
CTDNEP1-210ENST00000574322 ZNF653Q96CK0 615 aa30.35■■■□□ 2.45
CTDNEP1-210ENST00000574322 GTF2IRD1Q9UHL9 959 aa30.35■■■□□ 2.45
CTDNEP1-210ENST00000574322 TARSL2A2RTX5 802 aaKnown RBP30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 ITGB3P05106 788 aa30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 BRD3Q15059 726 aa30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 ACTRT1Q8TDG2 376 aa30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 ZNF606Q8WXB4 792 aa30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 RPS6KC1Q96S38 1066 aa30.34■■■□□ 2.45
CTDNEP1-210ENST00000574322 KCNK3O14649 394 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 KRT19P08727 400 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 NOMO3P69849 1222 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 PHF13Q86YI8 300 aaPredicted RBP30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 CYFIP2Q96F07 1278 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 SELENOOQ9BVL4 669 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 CYP3A43Q9HB55 503 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 CCDC151A5D8V7 595 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 CLSTN1O94985 981 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 PGK1P00558 417 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 WDR93Q6P2C0 686 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 RASGEF1CQ8N431 466 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 SNX27Q96L92 541 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 TSPAN18Q96SJ8 248 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 NUP85Q9BW27 656 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 EIF2AQ9BY44 585 aaKnown RBP30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 ALG6Q9Y672 507 aa30.33■■■□□ 2.45
CTDNEP1-210ENST00000574322 THAP12O43422 761 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 CST5P28325 142 aaPredicted RBP30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 NSFP46459 744 aaKnown RBP30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 RBP5P82980 135 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 ZBTB6Q15916 424 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 NBPF20Q3BBV1 942 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 ALKAL1Q6UXT8 129 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 MON1BQ7L1V2 547 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 SESTD1Q86VW0 696 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 ZNF564Q8TBZ8 553 aaPredicted RBP30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 MS4A14Q96JA4 679 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 PNKPQ96T60 521 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 DPP3Q9NY33 737 aa30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 CNOT8Q9UFF9 292 aaKnown RBP30.32■■■□□ 2.44
CTDNEP1-210ENST00000574322 MIF4GDA9UHW6 222 aaKnown RBP30.31■■■□□ 2.44
CTDNEP1-210ENST00000574322 DDX3YO15523 660 aaKnown RBP30.31■■■□□ 2.44
CTDNEP1-210ENST00000574322 LSM8O95777 96 aaKnown RBP30.31■■■□□ 2.44
CTDNEP1-210ENST00000574322 MYCNP04198 464 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms