RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 AARSP49588 968 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 WNT7BP56706 349 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 ADAM15Q13444 863 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 BIRC3Q13489 604 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 RTP2Q5QGT7 225 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 CD300LGQ6UXG3 332 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 CASP10Q92851 521 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 B3GALT6Q96L58 329 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 KLHL5Q96PQ7 755 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 THEGQ9P2T0 379 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
TRAPPC1-206ENST00000573989 TRIM49BA6NDI0 452 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 HUS1O60921 280 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 CLSTN1O94985 981 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 GNA14O95837 355 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 GLUD1P00367 558 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 TYMPP19971 482 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 NLRP12P59046 1061 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 CLDN10P78369 228 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 BFSP1Q12934 665 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 COL19A1Q14993 1142 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 TPD52L1Q16890 204 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 SASS6Q6UVJ0 657 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 FILIP1Q7Z7B0 1213 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 LNX1Q8TBB1 728 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 SENP8Q96LD8 212 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 DZANK1Q9NVP4 752 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 BACE2Q9Y5Z0 518 aa13.75□□□□□ -0.21
TRAPPC1-206ENST00000573989 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CYB561D2O14569 222 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 PPEF2O14830 753 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 TEX28O15482 410 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 ATICP31939 592 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 GTF2H1P32780 548 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 GTF2F1P35269 517 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CLCN4P51793 760 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 PMS1P54277 932 aaKnown RBP13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 STX17P56962 302 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CTC1Q2NKJ3 1217 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 LLGL2Q6P1M3 1020 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 TMEM184AQ6ZMB5 413 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 HPDLQ96IR7 371 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 MTRRQ9UBK8 725 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 FAM50BQ9Y247 325 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
TRAPPC1-206ENST00000573989 OAZ2O95190 189 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 CYP11A1P05108 521 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 KCNA5P22460 613 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 SKOR2Q2VWA4 1001 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 TCERG1LQ5VWI1 586 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 OVOS1Q6IE37 1185 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 CLSTN3Q9BQT9 956 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 IMPG2Q9BZV3 1241 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 PLEKHA4Q9H4M7 779 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 GDAP2Q9NXN4 497 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 SIX4Q9UIU6 781 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
TRAPPC1-206ENST00000573989 OR6C75A6NL08 312 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 SPTLC1O15269 473 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 LINC01565O15544 149 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms