RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MIS18BP1Q6P0N0 1132 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 C15orf39Q6ZRI6 1047 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 CEP128Q6ZU80 1094 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 FOXP3Q9BZS1 431 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 C17orf75Q9HAS0 396 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
NUP88-207ENST00000573584 ASMTLO95671 621 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 GARTP22102 1010 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 SLC8A3P57103 927 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 LMNB2Q03252 620 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 KAZNQ674X7 775 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 TRABD2AQ86V40 505 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 RMDN3Q96TC7 470 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 POC1B-GALNT4F8VUJ3 575 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
NUP88-207ENST00000573584 CHRNA5P30532 468 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 NFX1Q12986 1120 aaKnown RBP16.57■□□□□ 0.24
NUP88-207ENST00000573584 NR1H3Q13133 447 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 HP1BP3Q5SSJ5 553 aaPredicted RBP16.57■□□□□ 0.24
NUP88-207ENST00000573584 SAMD3Q8N6K7 520 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 GLIS1Q8NBF1 620 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 FHDC1Q9C0D6 1143 aaPredicted RBP16.57■□□□□ 0.24
NUP88-207ENST00000573584 ZNF148Q9UQR1 794 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 STARD13Q9Y3M8 1113 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 CEP83Q9Y592 693 aa16.57■□□□□ 0.24
NUP88-207ENST00000573584 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 HLA-DRAP01903 254 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 KRT10P13645 584 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 GCAP28676 217 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 CETN2P41208 172 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 GHRHRQ02643 423 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 VSIG1Q86XK7 387 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
NUP88-207ENST00000573584 MYLK2Q9H1R3 596 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TXLNGQ9NUQ3 528 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 PHTF1Q9UMS5 762 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 PCDHA10Q9Y5I2 948 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TBC1D12O60347 775 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ASNSP08243 561 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ZSCAN5DPP0CG00 497 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 KRT15P19012 456 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 PIK3CAP42336 1068 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 NOMO3P69849 1222 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ZACNQ401N2 412 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ATP13A4Q4VNC1 1196 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ABRAQ8N0Z2 381 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 SPOCK2Q92563 424 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TRABDQ9H4I3 376 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 KIAA1586Q9HCI6 787 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 UBN1Q9NPG3 1134 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 GABBR1Q9UBS5 961 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TRPC5Q9UL62 973 aaPredicted RBP16.56■□□□□ 0.24
NUP88-207ENST00000573584 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 MAGEB2O15479 319 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 LIASO43766 372 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
NUP88-207ENST00000573584 ENPEPQ07075 957 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 SPARCL1Q14515 664 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
NUP88-207ENST00000573584 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 DENND1AQ8TEH3 1009 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ERP27Q96DN0 273 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 RAB3IPQ96QF0 476 aaPredicted RBP16.56■□□□□ 0.24
NUP88-207ENST00000573584 PDCD2LQ9BRP1 358 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 KIF9Q9HAQ2 790 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 PCDHB4Q9Y5E5 795 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 SCINQ9Y6U3 715 aa16.56■□□□□ 0.24
NUP88-207ENST00000573584 ZNF646O15015 1829 aaPredicted RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 DNALI1O14645 258 aaPredicted RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 EXTL3O43909 919 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 GNA15P30679 374 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 TRIM72Q6ZMU5 477 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 VCPIP1Q96JH7 1222 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 TTC25Q96NG3 672 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 LRRC37BQ96QE4 947 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 SLCO1B3Q9NPD5 702 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 ZNF862O60290 1169 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 RAD17O75943 681 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 ETS1P14921 441 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 PECAM1P16284 738 aaPredicted RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 ATP2A2P16615 1042 aaKnown RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 ATF7P17544 494 aaPredicted RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 ARSEP51690 589 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 FASTKD3Q14CZ7 662 aaKnown RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
NUP88-207ENST00000573584 CAPN12Q6ZSI9 719 aa16.55■□□□□ 0.24
NUP88-207ENST00000573584 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms