RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FIZ1Q96SL8 496 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 KXD1Q9BQD3 176 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 ST6GALNAC4Q9H4F1 302 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 TBC1D17Q9HA65 648 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 ARHGEF3Q9NR81 526 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 WNT16Q9UBV4 365 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 CPSF3Q9UKF6 684 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 KCNH3Q9ULD8 1083 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 PATJQ8NI35 1801 aa10.47□□□□□ -0.73
NPLOC4-212ENST00000573328 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 ARHGEF37A1IGU5 675 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 KRBA1A5PL33 1030 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 ANHXE9PGG2 379 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 M0QZQ0 153 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 PPEF2O14830 753 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 SPTLC2O15270 562 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 TBC1D4O60343 1298 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 SEC24AO95486 1093 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 OR4Q2P0C623 313 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 CEBPBP17676 345 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 TWF1Q12792 350 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 MRPL58Q14197 206 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 POSTNQ15063 836 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 SLC5A9Q2M3M2 681 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 SPATA1Q5VX52 437 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 OVOS1Q6IE37 1185 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 RNF19BQ6ZMZ0 732 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 PDZD4Q76G19 769 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 ZNF720Q7Z2F6 126 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 TCEAL8Q8IYN2 117 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 ZNF512Q96ME7 567 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 ASB7Q9H672 318 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 PANK4Q9NVE7 773 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 DERAQ9Y315 318 aa10.46□□□□□ -0.73
NPLOC4-212ENST00000573328 OBSL1O75147 1896 aa10.46□□□□□ -0.74
NPLOC4-212ENST00000573328 USP34Q70CQ2 3546 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 KIF26AQ9ULI4 1882 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 COL4A3Q01955 1670 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 OR6C75A6NL08 312 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 ZNF197O14709 1029 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 PI15O43692 258 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 IL18RAPO95256 599 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 MYL4P12829 197 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 NPR3P17342 541 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 LILRA4P59901 499 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 PLD1Q13393 1074 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 ALCAMQ13740 583 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 ZBTB6Q15916 424 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 CYP4A22Q5TCH4 519 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 C9orf57Q5W0N0 161 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 ARMCX5Q6P1M9 558 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 CCDC65Q8IXS2 484 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 SENP8Q96LD8 212 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 FAM213AQ9BRX8 229 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 RPP25Q9BUL9 199 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 OXCT2Q9BYC2 517 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 IKZF4Q9H2S9 585 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 SLITRK6Q9H5Y7 841 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 ASAH2Q9NR71 780 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 SLC2A4RGQ9NR83 387 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 DPP3Q9NY33 737 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 GDE1Q9NZC3 331 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 C2CD2Q9Y426 696 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 YIPF1Q9Y548 306 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
NPLOC4-212ENST00000573328 VPS13AQ96RL7 3174 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 A0A087X0B3 334 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 PPP1R37O75864 691 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 OAZ2O95190 189 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 ADRB2P07550 413 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 TYMPP19971 482 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 ALDH1A3P47895 512 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 AARSP49588 968 aaKnown RBP eCLIP10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 TAF6P49848 677 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 CASP5P51878 434 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 EPHB3P54753 998 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 GPC5P78333 572 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 ASIC1P78348 528 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 TFAMQ00059 246 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 PFKPQ01813 784 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 KCNA1Q09470 495 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 STXBP4Q6ZWJ1 553 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 CCDC105Q8IYK2 499 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 HS6ST3Q8IZP7 471 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 SPRYD3Q8NCJ5 442 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 SNX21Q969T3 373 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 DHX58Q96C10 678 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms