RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 ERMP1Q7Z2K6 904 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 DNASE1L2Q92874 299 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 SMARCD2Q92925 531 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 CDK5RAP3Q96JB5 506 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 ZNF512Q96ME7 567 aaPredicted RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 FIZ1Q96SL8 496 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 DNAJC25Q9H1X3 360 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 ODF2LQ9ULJ1 636 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 TBX20Q9UMR3 447 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 UBQLN1Q9UMX0 589 aaKnown RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 YIPF1Q9Y548 306 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 MYL4P12829 197 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 MATR3P43243 847 aaKnown RBP eCLIP19.1■□□□□ 0.65
CIITA-206ENST00000571190 IQCEQ6IPM2 695 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 GPBP1Q86WP2 473 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 ZBTB44Q8NCP5 570 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 SHKBP1Q8TBC3 707 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 RUBCNQ92622 972 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 BICD1Q96G01 975 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 PGLYRP2Q96PD5 576 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 TRMT61BQ9BVS5 477 aaKnown RBP19.1■□□□□ 0.65
CIITA-206ENST00000571190 BRD9Q9H8M2 597 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 TRPV4Q9HBA0 871 aa19.1■□□□□ 0.65
CIITA-206ENST00000571190 ZNF334Q9HCZ1 680 aaPredicted RBP19.1■□□□□ 0.65
CIITA-206ENST00000571190 A0A0B4J269 797 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 H0YCG3 227 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 H3BQV1 296 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 OGTO15294 1046 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
CIITA-206ENST00000571190 LIG4P49917 911 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 PPP2R3AQ06190 1150 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 GPR17Q13304 367 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 DHX8Q14562 1220 aaKnown RBP19.09■□□□□ 0.65
CIITA-206ENST00000571190 TEAD2Q15562 447 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 SPATA1Q5VX52 437 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 TSSK4Q6SA08 328 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 TMC8Q8IU68 726 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 ELMOD1Q8N336 334 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 ZSCAN18Q8TBC5 510 aaPredicted RBP19.09■□□□□ 0.65
CIITA-206ENST00000571190 RSPRY1Q96DX4 576 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 AK8Q96MA6 479 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 TMEM209Q96SK2 561 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 TRPV5Q9NQA5 729 aa19.09■□□□□ 0.65
CIITA-206ENST00000571190 PRMT8Q9NR22 394 aaPredicted RBP19.09■□□□□ 0.65
CIITA-206ENST00000571190 ARNTLO00327 626 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 SPTLC1O15269 473 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 NCAM2O15394 837 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 SLC26A4O43511 780 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 LILRB5O75023 590 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 PSMC3P17980 439 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 GDI1P31150 447 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 DUSP4Q13115 394 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 MTAPQ13126 283 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 MCM6Q14566 821 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 MYCT1Q8N699 235 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 LEMD2Q8NC56 503 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 RPF1Q9H9Y2 349 aaKnown RBP19.08■□□□□ 0.64
CIITA-206ENST00000571190 ASAH2Q9NR71 780 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 CPSF3Q9UKF6 684 aaKnown RBP19.08■□□□□ 0.64
CIITA-206ENST00000571190 NDRG2Q9UN36 371 aaKnown RBP19.08■□□□□ 0.64
CIITA-206ENST00000571190 MRPS17Q9Y2R5 130 aaKnown RBP19.08■□□□□ 0.64
CIITA-206ENST00000571190 PCDHGA2Q9Y5H1 932 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 DCHS1Q96JQ0 3298 aa19.08■□□□□ 0.64
CIITA-206ENST00000571190 OR6C75A6NL08 312 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 ANKRD63C9JTQ0 380 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 HNRNPDLO14979 420 aaKnown RBP19.07■□□□□ 0.64
CIITA-206ENST00000571190 PLCG1P19174 1290 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 TYMPP19971 482 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 UBA7P41226 1012 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 LILRA4P59901 499 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 KARSQ15046 597 aaKnown RBP19.07■□□□□ 0.64
CIITA-206ENST00000571190 KYAT1Q16773 422 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 JADE1Q6IE81 842 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 CENPPQ6IPU0 288 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 DSTYKQ6XUX3 929 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 MFSD6LQ8IWD5 586 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 TTC9BQ8N6N2 239 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 ATAD1Q8NBU5 361 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 IRF7Q92985 503 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 OXCT2Q9BYC2 517 aaPredicted RBP19.07■□□□□ 0.64
CIITA-206ENST00000571190 PARVGQ9HBI0 331 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 ZSCAN32Q9NX65 697 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 SLC27A5Q9Y2P5 690 aa19.07■□□□□ 0.64
CIITA-206ENST00000571190 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.07■□□□□ 0.64
CIITA-206ENST00000571190 MTMR11A4FU01 709 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 HEPACAM2A8MVW5 462 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 TISP43B9A030 160 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 K7ENM7 598 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 MAN2B1O00754 1011 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 TRAK2O60296 914 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 FAM13AO94988 1023 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 TDGF1P13385 188 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 NMT1P30419 496 aaKnown RBP19.06■□□□□ 0.64
CIITA-206ENST00000571190 GTF2BQ00403 316 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 STXBP5Q5T5C0 1151 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 OVOS1Q6IE37 1185 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 MAMSTRQ6ZN01 415 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 USP37Q86T82 979 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 DEPDC1BQ8WUY9 529 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 RAD54LQ92698 747 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms