RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 OR4Q2P0C623 313 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 GJA1P17302 382 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 YWHAHQ04917 246 aaPredicted RBP16.08■□□□□ 0.16
NDE1-203ENST00000570727 GRM2Q14416 872 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 MCM6Q14566 821 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 ZNF528Q3MIS6 628 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 SLC39A4Q6P5W5 647 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 GPBP1Q86WP2 473 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 ZNF687Q8N1G0 1237 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 NELL2Q99435 816 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 LRRC3Q9BY71 257 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 CRISPLD1Q9H336 500 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 SPATA6Q9NWH7 488 aaPredicted RBP16.08■□□□□ 0.16
NDE1-203ENST00000570727 FBXO4Q9UKT5 387 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 UBQLN1Q9UMX0 589 aaKnown RBP16.08■□□□□ 0.16
NDE1-203ENST00000570727 DNAH14Q0VDD8 3507 aa16.08■□□□□ 0.16
NDE1-203ENST00000570727 PPEF2O14830 753 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 OGTO15294 1046 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 LAMTOR5O43504 91 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 CPB1P15086 417 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 UBA7P41226 1012 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 ID4P47928 161 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 LIG4P49917 911 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 PPP2R3AQ06190 1150 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 KYAT1Q16773 422 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
NDE1-203ENST00000570727 IQCEQ6IPM2 695 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
NDE1-203ENST00000570727 VITQ6UXI7 678 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 ZNF852Q6ZMS4 543 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 MAP4K3Q8IVH8 894 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 ELMOD1Q8N336 334 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 SUMF1Q8NBK3 374 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 CALML4Q96GE6 196 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 RPF1Q9H9Y2 349 aaKnown RBP16.07■□□□□ 0.16
NDE1-203ENST00000570727 SMC3Q9UQE7 1217 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 SCN1AP35498 2009 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
NDE1-203ENST00000570727 COL4A2P08572 1712 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 NCANO14594 1321 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 TRAK2O60296 914 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 MYL4P12829 197 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 PLCG1P19174 1290 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 VIPR2P41587 438 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 MAGEA9P43362 315 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 LILRA4P59901 499 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 GTF2BQ00403 316 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 CSTF1Q05048 431 aaKnown RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 DUSP4Q13115 394 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 GPR17Q13304 367 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 RAD54LQ92698 747 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 DNASE1L2Q92874 299 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 SMARCD2Q92925 531 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 PGLYRP2Q96PD5 576 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 TSPAN18Q96SJ8 248 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 TRMT61BQ9BVS5 477 aaKnown RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 OXCT2Q9BYC2 517 aaPredicted RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 DNAJC25Q9H1X3 360 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 BRD9Q9H8M2 597 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 PARVGQ9HBI0 331 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 ZNF334Q9HCZ1 680 aaPredicted RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 CPSF3Q9UKF6 684 aaKnown RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 YIPF1Q9Y548 306 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.06■□□□□ 0.16
NDE1-203ENST00000570727 TICRRQ7Z2Z1 1910 aa16.06■□□□□ 0.16
NDE1-203ENST00000570727 OR6C75A6NL08 312 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 K7ENM7 598 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 SPTLC1O15269 473 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 NCAM2O15394 837 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 XPOTO43592 962 aaKnown RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 FAM13AO94988 1023 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 TYMPP19971 482 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 SCP2P22307 547 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 MCM2P49736 904 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 FOXK2Q01167 660 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 TEAD2Q15562 447 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 JADE1Q6IE81 842 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 TMC8Q8IU68 726 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 KIAA2013Q8IYS2 634 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 DCLK2Q8N568 766 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 SHKBP1Q8TBC3 707 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 ZSCAN18Q8TBC5 510 aaPredicted RBP16.05■□□□□ 0.16
NDE1-203ENST00000570727 NELL1Q92832 810 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 SENP8Q96LD8 212 aa16.05■□□□□ 0.16
NDE1-203ENST00000570727 TMEM209Q96SK2 561 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms