RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	VARS2	Q5ST30	1063 aa	Known RBP	19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	THEM5	Q8N1Q8	247 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	C3orf58	Q8NDZ4	430 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	VN1R2	Q8NFZ6	395 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	ZNF461	Q8TAF7	563 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	SPATA20	Q8TB22	786 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	PHF7	Q9BWX1	381 aa	Predicted RBP	19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	MAN1C1	Q9NR34	630 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	TCF20	Q9UGU0	1960 aa	Known RBP	19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	CIT	O14578	2027 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	TGM5	O43548	720 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	XYLB	O75191	536 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	PAPLN	O95428	1278 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	NR3C1	P04150	777 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	TNNI1	P19237	187 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	TKT	P29401	623 aa	Known RBP	19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	SPAG1	Q07617	926 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	DLX2	Q07687	328 aa	Predicted RBP	19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	CYP24A1	Q07973	514 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	MRPL58	Q14197	206 aa	Known RBP	19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	CTXN3	Q4LDR2	81 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	TMEM86A	Q8N2M4	240 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	KREMEN2	Q8NCW0	462 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	GLIS3	Q8NEA6	775 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	SUSD6	Q92537	303 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	S1PR5	Q9H228	398 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	KCTD10	Q9H3F6	313 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	INTS13	Q9NVM9	706 aa		19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	USP15	Q9Y4E8	981 aa	Predicted RBP	19.41	■□□□□ 0.7
PKD1-238	ENST00000570150	GOLGA8IP	A6NC78	632 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	GOLGA8J	A6NMD2	632 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	KPNA7	A9QM74	516 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	PSMA7	O14818	248 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	IKBKB	O14920	756 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	HUS1	O60921	280 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CYP11A1	P05108	521 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	FAM163B	P0C2L3	166 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	EPCAM	P16422	314 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	OR1D2	P34982	312 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	BRCC3	P46736	316 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	LRRC63	Q05C16	580 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	PNOC	Q13519	176 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	OVOS1	Q6IE37	1185 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	LILRA6	Q6PI73	481 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	SYCE2	Q6PIF2	218 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	PRSS55	Q6UWB4	352 aa	Predicted RBP	19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CD300LG	Q6UXG3	332 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	INTS8	Q75QN2	995 aa	Known RBP	19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	DPH6	Q7L8W6	267 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CBWD2	Q8IUF1	395 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CSGALNACT2	Q8N6G5	542 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	TRIML1	Q8N9V2	468 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	MFSD14A	Q96MC6	490 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CGRRF1	Q99675	332 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CLSTN3	Q9BQT9	956 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	PDE11A	Q9HCR9	933 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	DMAC2	Q9NW81	257 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	HSFX1	Q9UBD0	423 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CACNG4	Q9UBN1	327 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	FBXW11	Q9UKB1	542 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	UST	Q9Y2C2	406 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	CDY1	Q9Y6F8	540 aa		19.4	■□□□□ 0.7
PKD1-238	ENST00000570150	TULP1	O00294	542 aa	Predicted RBP	19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	CLIC2	O15247	247 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	STX10	O60499	249 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	KRT13	P13646	458 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	ATIC	P31939	592 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	PLD1	Q13393	1074 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	FOXR2	Q6PJQ5	311 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	GPR149	Q86SP6	731 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	PALB2	Q86YC2	1186 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	EFCAB13	Q8IY85	973 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	PLCD3	Q8N3E9	789 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	TMC2	Q8TDI7	906 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	C2orf15	Q8WU43	125 aa	Known RBP	19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	B3GALT6	Q96L58	329 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	SENP8	Q96LD8	212 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	MKNK1	Q9BUB5	465 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	DNAI2	Q9GZS0	605 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	PCDHA5	Q9Y5H7	936 aa		19.39	■□□□□ 0.69
PKD1-238	ENST00000570150	CETN3	O15182	167 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	ZMYND10	O75800	440 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	ITGB3	P05106	788 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	KRT19	P08727	400 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	PRR29	P0C7W0	189 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	DLAT	P10515	647 aa	Known RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	ATF2	P15336	505 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	TRIM21	P19474	475 aa	Known RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	NR2F2	P24468	414 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	PSMC2	P35998	433 aa	Known RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	TRPC3	Q13507	836 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	CLUL1	Q15846	466 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	PPM1L	Q5SGD2	360 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	ELMOD1	Q8N336	334 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	ACSF2	Q96CM8	615 aa	Predicted RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	DHTKD1	Q96HY7	919 aa	Predicted RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	PIDD1	Q9HB75	910 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	BRWD1	Q9NSI6	2320 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	GDAP2	Q9NXN4	497 aa		19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	AGAP1	Q9UPQ3	857 aa		19.38	■□□□□ 0.69

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