RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 OR5B17Q8NGF7 314 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 TMEM169Q96HH4 297 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 ZNF560Q96MR9 790 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 CLDND1Q9NY35 253 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 PRG3Q9Y2Y8 225 aaPredicted RBP17.27■□□□□ 0.36
USB1-215ENST00000569252 ARHGEF37A1IGU5 675 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 GRM6O15303 877 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 LINC01565O15544 149 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 RB1P06400 928 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 CTNNB1P35222 781 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 BMPR1AP36894 532 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 LTBRP36941 435 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 MXI1P50539 228 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 WNT7BP56706 349 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 NCAPHQ15003 741 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 UPP1Q16831 310 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 SGSM1Q2NKQ1 1148 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 VWA3BQ502W6 1294 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 WDR44Q5JSH3 913 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 CDKAL1Q5VV42 579 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 C9orf57Q5W0N0 161 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 IRF2BP1Q8IU81 584 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 ZNF516Q92618 1163 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 CLP1Q92989 425 aaKnown RBP17.26■□□□□ 0.35
USB1-215ENST00000569252 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
USB1-215ENST00000569252 ZNF318Q5VUA4 2279 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 NT5C1B-RDH14C9J2C7 533 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 H3BNC9 293 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 C4BPAP04003 597 aaKnown RBP17.25■□□□□ 0.35
USB1-215ENST00000569252 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 P4HA1P13674 534 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
USB1-215ENST00000569252 ATICP31939 592 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 PIK3CAP42336 1068 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 SLC11A1P49279 550 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 ZP2Q05996 745 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 ELAVL2Q12926 359 aaKnown RBP17.25■□□□□ 0.35
USB1-215ENST00000569252 NCOA4Q13772 614 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 NAB2Q15742 525 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 SV2CQ496J9 727 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 PLEKHO2Q8TD55 490 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 SLC35C1Q96A29 364 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 PHOX2BQ99453 314 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 VPS16Q9H269 839 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 CITO14578 2027 aa17.25■□□□□ 0.35
USB1-215ENST00000569252 PIRO00625 290 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 P4HA2O15460 535 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 FMO5P49326 533 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 TAF6P49848 677 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 GUCY2FP51841 1108 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 MCCD1P59942 119 aaPredicted RBP17.24■□□□□ 0.35
USB1-215ENST00000569252 MYL7Q01449 175 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 SOX4Q06945 474 aaPredicted RBP17.24■□□□□ 0.35
USB1-215ENST00000569252 PPP3CAQ08209 521 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 ZACNQ401N2 412 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 TDRD10Q5VZ19 366 aaKnown RBP17.24■□□□□ 0.35
USB1-215ENST00000569252 LRRC52Q8N7C0 313 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 TAF4BQ92750 862 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 C11orf84Q9BUA3 381 aaPredicted RBP17.24■□□□□ 0.35
USB1-215ENST00000569252 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 TAB2Q9NYJ8 693 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
USB1-215ENST00000569252 MUTYHQ9UIF7 546 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 ADAM28Q9UKQ2 775 aa17.24■□□□□ 0.35
USB1-215ENST00000569252 ANO9A1A5B4 782 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 DCXO43602 365 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 TPM3P06753 285 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 IRS1P35568 1242 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 TNNC1P63316 161 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 HYAL1Q12794 435 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 KRT31Q15323 416 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 TIGD5Q53EQ6 642 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 KIAA1841Q6NSI8 718 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 GBP6Q6ZN66 633 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
USB1-215ENST00000569252 IGSF21Q96ID5 467 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
USB1-215ENST00000569252 RAB20Q9NX57 234 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 HCSTQ9UBK5 93 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
USB1-215ENST00000569252 SF3B1O75533 1304 aaKnown RBP eCLIP17.22■□□□□ 0.35
USB1-215ENST00000569252 PTPRJQ12913 1337 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 TECTAO75443 2155 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 KIAA1671Q9BY89 1806 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms