RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RSPO2Q6UXX9 243 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-225ENST00000569245 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 PLCD3Q8N3E9 789 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 CCDC47Q96A33 483 aaKnown RBP15.67■□□□□ 0.1
COMMD4-225ENST00000569245 SAAL1Q96ER3 474 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 SUSD3Q96L08 255 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 LRFN3Q9BTN0 628 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 GTPBP4Q9BZE4 634 aaKnown RBP15.67■□□□□ 0.1
COMMD4-225ENST00000569245 PRKD2Q9BZL6 878 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 ASB7Q9H672 318 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 LIMD1Q9UGP4 676 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 FBXW11Q9UKB1 542 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 POLIQ9UNA4 740 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 USTQ9Y2C2 406 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 DERAQ9Y315 318 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 RHOBTB3O94955 611 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 IL18RAPO95256 599 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 LDHAP00338 332 aaKnown RBP15.66■□□□□ 0.1
COMMD4-225ENST00000569245 ADRB2P07550 413 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 GARTP22102 1010 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 ELF1P32519 619 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 EHHADHQ08426 723 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 STX1AQ16623 288 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 KMT5BQ4FZB7 885 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 USP37Q86T82 979 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 SLC7A14Q8TBB6 771 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 EDAQ92838 391 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 ZNF707Q96C28 371 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-225ENST00000569245 PCIF1Q9H4Z3 704 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 C11orf16Q9NQ32 467 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
COMMD4-225ENST00000569245 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 BIN1O00499 593 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 PRRG1O14668 218 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 CCL16O15467 120 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 XYLBO75191 536 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 CAVIN2O95810 425 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 COL9A1P20849 921 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 GBP2P32456 591 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 POU5F1Q01860 360 aaKnown RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 PSMD2Q13200 908 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 PTPN21Q16825 1174 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 FAM26FQ5R3K3 315 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 ZNF280DQ6N043 979 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 CRELD2Q6UXH1 353 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 ZDHHC14Q8IZN3 488 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 GLIS3Q8NEA6 775 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 CBWD1Q9BRT8 395 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 RHOBTB2Q9BYZ6 727 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 TSPY26PQ9H489 355 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 WDR6Q9NNW5 1121 aaKnown RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 DPP3Q9NY33 737 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 RBAKQ9NYW8 714 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 FBXL5Q9UKA1 691 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 C2CD2Q9Y426 696 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 TIMM13Q9Y5L4 95 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-225ENST00000569245 TRIOO75962 3097 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 CLUHO75153 1309 aa15.65■□□□□ 0.1
COMMD4-225ENST00000569245 PRR33A8MZF0 331 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 PPEF2O14830 753 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 EXTL3O43909 919 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 HNRNPA1P09651 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 BMP6P22004 513 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 LILRA4P59901 499 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 ZXDAP98168 799 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 TFAMQ00059 246 aaKnown RBP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 ROR1Q01973 937 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 YWHAHQ04917 246 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 MRPL58Q14197 206 aaKnown RBP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 ZNF658Q5TYW1 1059 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 SLC8B1Q6J4K2 584 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 GRASPQ7Z6J2 395 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-225ENST00000569245 MLKLQ8NB16 471 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 ZSWIM2Q8NEG5 633 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 EXOC1Q9NV70 894 aa15.64■□□□□ 0.09
COMMD4-225ENST00000569245 M0QZQ0 153 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 EIF3DO15371 548 aaKnown RBP eCLIP15.63■□□□□ 0.09
COMMD4-225ENST00000569245 ASGR2P07307 311 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 ODC1P11926 461 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 CPB1P15086 417 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 MTMR3Q13615 1198 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 DPCR1Q3MIW9 517 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 COBLL1Q53SF7 1204 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 CT47A1Q5JQC4 288 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-225ENST00000569245 TRIM67Q6ZTA4 783 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 GET4Q7L5D6 327 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-225ENST00000569245 NELFCDQ8IXH7 590 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 GPD1LQ8N335 351 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 CACTINQ8WUQ7 758 aaKnown RBP15.63■□□□□ 0.09
COMMD4-225ENST00000569245 CYP4F11Q9HBI6 524 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 SLC39A2Q9NP94 309 aa15.63■□□□□ 0.09
COMMD4-225ENST00000569245 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
COMMD4-225ENST00000569245 WDR27A2RRH5 827 aa15.62■□□□□ 0.09
COMMD4-225ENST00000569245 PIRO00625 290 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms