RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ERO1BQ86YB8 467 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 LZTR1Q8N653 840 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 GMCL1P1Q8NEA9 526 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
CDH11-216ENST00000569128 SMARCC2Q8TAQ2 1214 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 USP33Q8TEY7 942 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 MYLIPQ8WY64 445 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 TRMT2BQ96GJ1 504 aaKnown RBP9.04□□□□□ -0.96
CDH11-216ENST00000569128 WNK4Q96J92 1243 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 MAP3K14Q99558 947 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 KCNJ15Q99712 375 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 SLC13A1Q9BZW2 595 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 CDIP1Q9H305 208 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 AS3MTQ9HBK9 375 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 GJB4Q9NTQ9 266 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 FBLN5Q9UBX5 448 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 GPR160Q9UJ42 338 aa9.04□□□□□ -0.96
CDH11-216ENST00000569128 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
CDH11-216ENST00000569128 C22orf46C9J442 243 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 TMEM232C9JQI7 657 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 CPLX1O14810 134 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 PRKD3O94806 890 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 HSP90AA1P07900 732 aaKnown RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 RAC2P15153 192 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 IFNAR1P17181 557 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 RCAN1P53805 252 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 CORO7P57737 925 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 FKBP1BP68106 108 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 PPATQ06203 517 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 PPIL2Q13356 520 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 MOGSQ13724 837 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 ASPRV1Q53RT3 343 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 ZFYVE27Q5T4F4 411 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 ARTNQ5T4W7 220 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 C10orf62Q5T681 223 aaPredicted RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 IQSEC1Q6DN90 963 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 SAPCD2Q86UD0 394 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 PLEKHO2Q8TD55 490 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 SHISA4Q96DD7 197 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 JAM3Q9BX67 310 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 RBM28Q9NW13 759 aaKnown RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 ORC3Q9UBD5 711 aaPredicted RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 ACSL6Q9UKU0 697 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 COQ6Q9Y2Z9 468 aa9.03□□□□□ -0.96
CDH11-216ENST00000569128 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
CDH11-216ENST00000569128 C19orf81C9J6K1 198 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 FAM47E-STBD1D6RA91 191 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 VCAM1P19320 739 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 KIF5BP33176 963 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 FAPQ12884 760 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 PKN1Q16512 942 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 MINDY4Q4G0A6 757 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 OTUD7BQ6GQQ9 843 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 GADL1Q6ZQY3 521 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 ADGRF4Q8IZF3 695 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 INTS4Q96HW7 963 aaKnown RBP9.02□□□□□ -0.97
CDH11-216ENST00000569128 C12orf42Q96LP6 360 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 PIGSQ96S52 555 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 LLPHQ9BRT6 129 aaKnown RBP9.02□□□□□ -0.97
CDH11-216ENST00000569128 SARGQ9BW04 601 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 SH2D4AQ9H788 454 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 JMJD4Q9H9V9 463 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 PDLIM7Q9NR12 457 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH11-216ENST00000569128 SAMD15Q9P1V8 674 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 PNMA8BQ9ULN7 279 aaPredicted RBP9.02□□□□□ -0.97
CDH11-216ENST00000569128 SYNPO2Q9UMS6 1093 aa9.02□□□□□ -0.97
CDH11-216ENST00000569128 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.02□□□□□ -0.97
CDH11-216ENST00000569128 A0A0G2JLL6 359 aaPredicted RBP9.01□□□□□ -0.97
CDH11-216ENST00000569128 CCDC196A0A1B0GTZ2 297 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 A0A1W2PQJ5 194 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 H7BY64 318 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 CXCL11O14625 94 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 ADAMTS3O15072 1205 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 DHX16O60231 1041 aaKnown RBP9.01□□□□□ -0.97
CDH11-216ENST00000569128 PEX10O60683 326 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 CKMP06732 381 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 DDIT3P35638 169 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 GNAQP50148 359 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 DNM2P50570 870 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 USP14P54578 494 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 HTRA3P83110 453 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 CYP4F8P98187 520 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 GUCY1B3Q02153 619 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 FSTL1Q12841 308 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 IKQ13123 557 aaPredicted RBP9.01□□□□□ -0.97
CDH11-216ENST00000569128 PKP1Q13835 747 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 PPP2R5BQ15173 497 aa9.01□□□□□ -0.97
CDH11-216ENST00000569128 SKOR2Q2VWA4 1001 aaPredicted RBP9.01□□□□□ -0.97
CDH11-216ENST00000569128 GPATCH4Q5T3I0 446 aaKnown RBP9.01□□□□□ -0.97
CDH11-216ENST00000569128 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms