RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SUGP1Q8IWZ8 645 aaKnown RBP8.49□□□□□ -1.05
CDH3-209ENST00000569080 TMEM105Q8N8V8 129 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 APPL2Q8NEU8 664 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 CXorf38Q8TB03 319 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ITFG1Q8TB96 612 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 FGF13Q92913 245 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 FAM122AQ96E09 287 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ZNF396Q96N95 335 aaPredicted RBP8.49□□□□□ -1.05
CDH3-209ENST00000569080 CBWD1Q9BRT8 395 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 CRISPLD1Q9H336 500 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 CUEDC2Q9H467 287 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ASB7Q9H672 318 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH3-209ENST00000569080 CDH7Q9ULB5 785 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ZDHHC9Q9Y397 364 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
CDH3-209ENST00000569080 INSL5Q9Y5Q6 135 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 NUMBLQ9Y6R0 609 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 FRYLO94915 3013 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 TCHHQ07283 1943 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 KRBA1A5PL33 1030 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 XPOTO43592 962 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 XYLBO75191 536 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 RHOP08100 348 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 OR4Q2P0C623 313 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 SRFP11831 508 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 IDEP14735 1019 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 GARTP22102 1010 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 AVPR2P30518 371 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 CCR2P41597 374 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 YWHAHQ04917 246 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 DNM1Q05193 864 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 RESP18Q5W5W9 173 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 SCARA3Q6AZY7 606 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 PARM1Q6UWI2 310 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 EPM2AIP1Q7L775 607 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 SLC44A3Q8N4M1 653 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 ST13P5Q8NFI4 369 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 OR10T2Q8NGX3 314 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 POMGNT1Q8WZA1 660 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 FGF14Q92915 247 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 DHX58Q96C10 678 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 SAAL1Q96ER3 474 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 CHAMP1Q96JM3 812 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 FAM84AQ96KN4 292 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 SENP8Q96LD8 212 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 ACCSQ96QU6 501 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 RTP3Q9BQQ7 232 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 RPP25Q9BUL9 199 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 PANK4Q9NVE7 773 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 AFF4Q9UHB7 1163 aaKnown RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 KCNH3Q9ULD8 1083 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 PCDHA7Q9UN72 937 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 YIPF1Q9Y548 306 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 ZFP37Q9Y6Q3 630 aaPredicted RBP8.48□□□□□ -1.05
CDH3-209ENST00000569080 PTPRJQ12913 1337 aa8.48□□□□□ -1.05
CDH3-209ENST00000569080 KIF26AQ9ULI4 1882 aaPredicted RBP8.47□□□□□ -1.05
CDH3-209ENST00000569080 OR6C75A6NL08 312 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 MOSPD3O75425 235 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 PRPF6O94906 941 aaKnown RBP8.47□□□□□ -1.05
CDH3-209ENST00000569080 IL18RAPO95256 599 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 CYP11A1P05108 521 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 CEBPBP17676 345 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 FCARP24071 287 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 CASP1P29466 404 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 EPHA5P54756 1037 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 ARPP19P56211 112 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 ADCY1Q08828 1119 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 MYBPC2Q14324 1141 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 POSTNQ15063 836 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 NT5DC4Q86YG4 428 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 CCDC65Q8IXS2 484 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 TTC9BQ8N6N2 239 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 C1orf127Q8N9H9 656 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 FAM212AQ96EL1 285 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 TMEM209Q96SK2 561 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 C7orf25Q9BPX7 421 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 FAM213AQ9BRX8 229 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 MAGEF1Q9HAY2 307 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 CYP4F11Q9HBI6 524 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 SLC2A4RGQ9NR83 387 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 RBAKQ9NYW8 714 aaPredicted RBP8.47□□□□□ -1.05
CDH3-209ENST00000569080 CEP72Q9P209 647 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 MAFFQ9ULX9 164 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 POLIQ9UNA4 740 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 EXOC7Q9UPT5 735 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms