RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 REXO2Q9Y3B8 237 aaKnown RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 KIF15Q9NS87 1388 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 PTPRUQ92729 1446 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 ASXL1Q8IXJ9 1541 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 PTPN23Q9H3S7 1636 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 E9PCH4 1651 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CCDC154A6NI56 674 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 GPR32O75388 356 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PRSS23O95084 383 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PEX11BO96011 259 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ATP5JP18859 108 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 DDCP20711 480 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC6A2P23975 617 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 KIF23Q02241 960 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PLEKHG6Q3KR16 790 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PDCD4Q53EL6 469 aaKnown RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 GJC2Q5T442 439 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 RHOUQ7L0Q8 258 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 GDF7Q7Z4P5 450 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 DEFB132Q7Z7B7 95 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 MRGPREQ86SM8 312 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF483Q8TF39 744 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CASKIN2Q8WXE0 1202 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 LARP4BQ92615 738 aaKnown RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CLIP3Q96DZ5 547 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PHACTR3Q96KR7 559 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 PCED1AQ9H1Q7 454 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 TMEM140Q9NV12 185 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 FBXO34Q9NWN3 711 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CLCA2Q9UQC9 943 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 MRFAP1Q9Y605 127 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 MYBBP1AQ9BQG0 1328 aaKnown RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 KANK1Q14678 1352 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ABCC5O15440 1437 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 ARHGAP31Q2M1Z3 1444 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 FGD6Q6ZV73 1430 aa4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CDK12Q9NYV4 1490 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P6-201ENST00000569046 CCDC78A2IDD5 438 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 LPXNO60711 386 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 NCR1O76036 304 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 RECQL4O94761 1208 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 GDF5P43026 501 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC16A1P53985 500 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 ABHD18Q0P651 414 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 UBXN2BQ14CS0 331 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF529Q6P280 563 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 Q6ZPA2 131 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 SEM1Q6ZVN7 128 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 MED25Q71SY5 747 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 UBE3BQ7Z3V4 1068 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 KAT5Q92993 513 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 LRRC59Q96AG4 307 aaKnown RBP4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 CYFIP2Q96F07 1278 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 DMRTA2Q96SC8 542 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 DCLRE1CQ96SD1 692 aaKnown RBP4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 MLST8Q9BVC4 326 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 MANSC1Q9H8J5 431 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 CHPF2Q9P2E5 772 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 USP15Q9Y4E8 981 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 PCDHB1Q9Y5F3 818 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 HS3ST4Q9Y661 456 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 PNPLA6Q8IY17 1366 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZFYVE9O95405 1425 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 NRXN3Q9Y4C0 1643 aa4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 RGPD8O14715 1765 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P6-201ENST00000569046 UNC13BO14795 1591 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 NOS1P29475 1434 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 MST1RQ04912 1400 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 MYOM3Q5VTT5 1437 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 ADAMTS13Q76LX8 1427 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 PLEKHG1Q9ULL1 1385 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 CYR61O00622 381 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 ELANEP08246 267 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 KRT4P19013 534 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 MAKP20794 623 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 MGAT1P26572 445 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 SLC6A4P31645 630 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 MCM7P33993 719 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 ADKP55263 362 aaKnown RBP4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 EXOSC10Q01780 885 aaKnown RBP4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 AGAP9Q5VTM2 703 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 LRRC55Q6ZSA7 311 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 PLXDC1Q8IUK5 500 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 IFI44Q8TCB0 444 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 NEU4Q8WWR8 484 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 HAS1Q92839 578 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 HDAC10Q969S8 669 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 LENG9Q96B70 501 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 TMX3Q96JJ7 454 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 SORCS2Q96PQ0 1159 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 FAM193BQ96PV7 902 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 SLC46A2Q9BY10 475 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 DDX56Q9NY93 547 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms