RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	FAM26F	Q5R3K3	315 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ZBTB41	Q5SVQ8	909 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	RESP18	Q5W5W9	173 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	OVOS1	Q6IE37	1185 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	SLC39A4	Q6P5W5	647 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	UNC13D	Q70J99	1090 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	BMP8A	Q7Z5Y6	402 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	GPD1L	Q8N335	351 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	DOCK6	Q96HP0	2047 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ANKRD36BP1	Q96IX9	119 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF512	Q96ME7	567 aa	Predicted RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	PRRX2	Q99811	253 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	STRA6	Q9BX79	667 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	KCNH6	Q9H252	994 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	RBAK	Q9NYW8	714 aa	Predicted RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	FBXL5	Q9UKA1	691 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	FBXL21	Q9UKT6	434 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	SCN1A	P35498	2009 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	UBE4B	O95155	1302 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF233	A6NK53	670 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	STK25	O00506	426 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF197	O14709	1029 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ADAM12	O43184	909 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	FAM189A1	O60320	539 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ABLIM3	O94929	683 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	OAZ2	O95190	189 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	KIF20A	O95235	890 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	MYL1	P05976	194 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ASGR2	P07307	311 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	NFIC	P08651	508 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	POU2F2	P09086	479 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	SLFN14	P0C7P3	912 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	TYMP	P19971	482 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	CMA1	P23946	247 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ALDH1A3	P47895	512 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	NUCB2	P80303	420 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ADCY1	Q08828	1119 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	KCNA1	Q09470	495 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	MRPL58	Q14197	206 aa	Known RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	PABPC1L	Q4VXU2	614 aa	Known RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	CYP4A22	Q5TCH4	519 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	C9orf57	Q5W0N0	161 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	CNNM4	Q6P4Q7	775 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	CD300LG	Q6UXG3	332 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	MTSS1L	Q765P7	747 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF707	Q96C28	371 aa	Predicted RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	SAAL1	Q96ER3	474 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	SENP8	Q96LD8	212 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	FNBP1	Q96RU3	617 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	PCIF1	Q9H4Z3	704 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	KCNK12	Q9HB15	430 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	C11orf16	Q9NQ32	467 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	EXOC1	Q9NV70	894 aa		11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	CGN	Q9P2M7	1197 aa	Known RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	AFF4	Q9UHB7	1163 aa	Known RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	MRPS23	Q9Y3D9	190 aa	Known RBP	11.21	□□□□□ -0.61
UBR1-207	ENST00000568782	DOCK8	Q8NF50	2099 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	WDR27	A2RRH5	827 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	TISP43	B9A030	160 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	PIR	O00625	290 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	CYB561D2	O14569	222 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	PAPLN	O95428	1278 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	TNNC2	P02585	160 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	KRT19	P08727	400 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	LAMP2	P13473	410 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	ADSS	P30520	456 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	SYK	P43405	635 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	CASP5	P51878	434 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	EPHB3	P54753	998 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	MYO1E	Q12965	1108 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	PSMD2	Q13200	908 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	MYBPC2	Q14324	1141 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	HFE2	Q6ZVN8	426 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	BRSK2	Q8IWQ3	736 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	TCEAL8	Q8IYN2	117 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	FBXL6	Q8N531	539 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	CSGALNACT2	Q8N6G5	542 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	LEMD2	Q8NC56	503 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	GOLGA5	Q8TBA6	731 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	FAM122A	Q96E09	287 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	BLZF1	Q9H2G9	400 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	EPS15L1	Q9UBC2	864 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	CDH7	Q9ULB5	785 aa		11.2	□□□□□ -0.62
UBR1-207	ENST00000568782	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.2	□□□□□ -0.62
UBR1-207	ENST00000568782		A0A1B0GVL5	298 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	GOLGA8IP	A6NC78	632 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	GOLGA8J	A6NMD2	632 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	KPNA7	A9QM74	516 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	MEFV	O15553	781 aa	Predicted RBP	11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	HUS1	O60921	280 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	PRPF40A	O75400	957 aa	Known RBP	11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	IGFBP6	P24592	240 aa	Predicted RBP	11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	AARS	P49588	968 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	GUCY2F	P51841	1108 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	RBP5	P82980	135 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	TSPY1	Q01534	308 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	SMARCB1	Q12824	385 aa		11.19	□□□□□ -0.62
UBR1-207	ENST00000568782	GPR17	Q13304	367 aa		11.19	□□□□□ -0.62

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