RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 MIA3Q5JRA6 1907 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 MYH15Q9Y2K3 1946 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SMIM28A0A1B0GU29 152 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 VWA3AA6NCI4 1184 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SFI1A8K8P3 1242 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 E9PMD0 336 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 F8W810 466 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PRRG1O14668 218 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PTGESO14684 152 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SLC16A4O15374 487 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CCL16O15467 120 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CLDN3O15551 220 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SLC26A4O43511 780 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 XPOTO43592 962 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GFRA3O60609 400 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 STK10O94804 968 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 KIF4AO95239 1232 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 EFEMP2O95967 443 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 BMP15O95972 392 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PDGFBP01127 241 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 LRG1P02750 347 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 KRT18P05783 430 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 C8AP07357 584 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CFHP08603 1231 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 MCF2P10911 925 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SRFP11831 508 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PLS3P13797 630 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ATF4P18848 351 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SCP2P22307 547 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GJB2P29033 226 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 HOXA9P31269 272 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 RPL9P32969 192 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ABCD1P33897 745 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 OR1D2P34982 312 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 UBA7P41226 1012 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GRM5P41594 1212 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CLCNKBP51801 687 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 AMPD3Q01432 767 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ST3GAL1Q11201 340 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 TCF15Q12870 199 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 RAB33AQ14088 237 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ENOX2Q16206 610 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 KYAT1Q16773 422 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 UPP1Q16831 310 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GLRA4Q5JXX5 417 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 RTP2Q5QGT7 225 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 NT5DC1Q5TFE4 455 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 LARP1BQ659C4 914 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ARL6IP4Q66PJ3 421 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 RINT1Q6NUQ1 792 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 LILRA6Q6PI73 481 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 MPZL3Q6UWV2 235 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 C1orf186Q6ZWK4 172 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 MTSS1LQ765P7 747 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GET4Q7L5D6 327 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 GRASPQ7Z6J2 395 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 FILIP1Q7Z7B0 1213 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SLC44A3Q8N4M1 653 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 C4orf32Q8N8J7 132 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 APPL2Q8NEU8 664 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 LNX1Q8TBB1 728 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 KCNG4Q8TDN1 519 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 RELTQ969Z4 430 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CRELD1Q96HD1 420 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 ACO2Q99798 780 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CLSTN3Q9BQT9 956 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PAAF1Q9BRP4 392 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 NTPCRQ9BSD7 190 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 KIFC3Q9BVG8 833 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CCDC113Q9H0I3 377 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 CDH7Q9ULB5 785 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 USP20Q9Y2K6 914 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 SIT1Q9Y3P8 196 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PCDHGA11Q9Y5H2 935 aa5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 PTPRZ1P23471 2315 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-213ENST00000568358 TRIOO75962 3097 aa5.09□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF638Q14966 1978 aaKnown RBP5.09□□□□□ -1.6
HERPUD1-213ENST00000568358 TCHHQ07283 1943 aa5.09□□□□□ -1.6
HERPUD1-213ENST00000568358 PDCD11Q14690 1871 aaKnown RBP5.09□□□□□ -1.6
HERPUD1-213ENST00000568358 ARHGEF37A1IGU5 675 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TMEM189-UBE2V1I3L0A0 370 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PODXLO00592 558 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF197O14709 1029 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 SYN3O14994 580 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 NCAM2O15394 837 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 NDUFB5O43674 189 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CREB3O43889 395 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 FZD6O60353 706 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TOM1L1O75674 476 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PLA2G4BP0C869 781 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 HARSP12081 509 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 KCNE1P15382 129 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PTPN2P17706 415 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 AOC1P19801 751 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PDCP20941 246 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 FGFR3P22607 806 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 GUCY2CP25092 1073 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CDC25AP30304 524 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MCM4P33991 863 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms