RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 NPTX2P47972 431 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SNAP25P60880 206 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CLDN10P78369 228 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 AUHQ13825 339 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 COG2Q14746 738 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 MORF4L2Q15014 288 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 PGM5Q15124 567 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CNGA2Q16280 664 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZC3H12AQ5D1E8 599 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 TJAP1Q5JTD0 557 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZFYVE27Q5T4F4 411 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 LGSNQ5TDP6 509 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 FAM160B1Q5W0V3 765 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 RNF43Q68DV7 783 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF772Q68DY9 489 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 KCNV1Q6PIU1 500 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZDHHC24Q6UX98 284 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SPATA21Q7Z572 469 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ARHGEF19Q8IW93 802 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 FUKQ8N0W3 1084 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ARHGAP24Q8N264 748 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZCCHC9Q8N567 271 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 TMEM35BQ8NCS4 154 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 HELQQ8TDG4 1101 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CKAP2Q8WWK9 683 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 TCP11Q8WWU5 503 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 GLG1Q92896 1179 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SMC6Q96SB8 1091 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 PDCD2LQ9BRP1 358 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CBWD1Q9BRT8 395 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF341Q9BYN7 854 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 DCLK3Q9C098 648 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 C2orf40Q9H1Z8 148 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SEMA4AQ9H3S1 761 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 PXMP2Q9NR77 195 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 STK32BQ9NY57 414 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ADAM22Q9P0K1 906 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 AGO2Q9UKV8 859 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ZNRF3Q9ULT6 936 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 COG5Q9UP83 839 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SHOC2Q9UQ13 582 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CD2APQ9Y5K6 639 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ASTN2O75129 1339 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 FAM47DPA6NHR8 397 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 K7ERI5 159 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 MGRN1O60291 552 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SNX3O60493 162 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 WFS1O76024 890 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ZWINTO95229 277 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 APBA3O96018 575 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 DLATP10515 647 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 MYCLP12524 364 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 UNGP13051 313 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 P4HA1P13674 534 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 BRAFP15056 766 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 GNA15P30679 374 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SSR1P43307 286 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 POLGP54098 1239 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SLC8A3P57103 927 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ZACNQ401N2 412 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 PREPLQ4J6C6 727 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC38Q502W7 563 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SH3D19Q5HYK7 790 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 WLSQ5T9L3 541 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 FBXW10Q5XX13 1052 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 DCUN1D2Q6PH85 259 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ZPBP2Q6X784 338 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 RGS9BPQ6ZS82 235 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 POLNQ7Z5Q5 900 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ANKS1BQ7Z6G8 1248 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 VSIG10LQ86VR7 867 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ZBTB8OSQ8IWT0 167 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 FEZF2Q8TBJ5 459 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ACER1Q8TDN7 264 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 FBXO41Q8TF61 875 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SLC20A1Q8WUM9 679 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 HLA-CQ95604 372 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 ELAC2Q9BQ52 826 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 OSBPL8Q9BZF1 889 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 CDC42EP4Q9H3Q1 356 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms