RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TNNI1P19237 187 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 BMP6P22004 513 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 POLR2BP30876 1174 aaKnown RBP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 AARSP49588 968 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 DUOXA2Q1HG44 320 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 CEP135Q66GS9 1140 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 ANKS3Q6ZW76 656 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 CXorf38Q8TB03 319 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 MTRRQ9UBK8 725 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 SIX4Q9UIU6 781 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 CDH22Q9UJ99 828 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 MTCL1Q9Y4B5 1905 aaKnown RBP14.04□□□□□ -0.16
CNOT1-213ENST00000568158 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 TBC1D4O60343 1298 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 TNNC2P02585 160 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 KRT19P08727 400 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 WEE2P0C1S8 567 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 SRGAP2BP0DMP2 458 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 TAF6P49848 677 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 PMS1P54277 932 aaKnown RBP14.04□□□□□ -0.16
CNOT1-213ENST00000568158 ARPP19P56211 112 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 ADAM9Q13443 819 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 MORC3Q14149 939 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 MYBPC2Q14324 1141 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 ZCWPW2Q504Y3 356 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 RARS2Q5T160 578 aaKnown RBP14.04□□□□□ -0.16
CNOT1-213ENST00000568158 ANKRD40Q6AI12 368 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 CENPPQ6IPU0 288 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 PDXDC1Q6P996 788 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 ADSSL1Q8N142 457 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 PARD3BQ8TEW8 1205 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 TMEM174Q8WUU8 243 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 EEF2KMTQ96G04 330 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 FNBP1Q96RU3 617 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 KIAA1468Q9P260 1216 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 FBXL5Q9UKA1 691 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 BACE2Q9Y5Z0 518 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 CDY1Q9Y6F8 540 aa14.04□□□□□ -0.16
CNOT1-213ENST00000568158 KPNA7A9QM74 516 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 H7C4K7 107 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 CYB561D2O14569 222 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 GLUD1P00367 558 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 HOXB8P17481 243 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-213ENST00000568158 NR2F2P24468 414 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 DLG4P78352 724 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 RBP5P82980 135 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 CREMQ03060 361 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 RAB33AQ14088 237 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 NFIL3Q16649 462 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 PUS10Q3MIT2 529 aaKnown RBP14.03□□□□□ -0.16
CNOT1-213ENST00000568158 CTXN3Q4LDR2 81 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 COBLL1Q53SF7 1204 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 TRAPPC11Q7Z392 1133 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 WDR49Q8IV35 697 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 SMRP1Q8NCR6 262 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 KREMEN2Q8NCW0 462 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-213ENST00000568158 CGRRF1Q99675 332 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 FRMD4BQ9Y2L6 1034 aa14.03□□□□□ -0.16
CNOT1-213ENST00000568158 USP15Q9Y4E8 981 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-213ENST00000568158 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.16
CNOT1-213ENST00000568158 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.17
CNOT1-213ENST00000568158 RFPL2O75678 378 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 AKAP3O75969 853 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.17
CNOT1-213ENST00000568158 RPL13P26373 211 aaKnown RBP14.02□□□□□ -0.17
CNOT1-213ENST00000568158 YWHAHQ04917 246 aaPredicted RBP14.02□□□□□ -0.17
CNOT1-213ENST00000568158 BFSP1Q12934 665 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 SMAD4Q13485 552 aaKnown RBP14.02□□□□□ -0.17
CNOT1-213ENST00000568158 WSCD1Q658N2 575 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 TMC5Q6UXY8 1006 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 USP37Q86T82 979 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 ADAM7Q9H2U9 754 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 PLSCR2Q9NRY7 297 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 DZANK1Q9NVP4 752 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 ITGA11Q9UKX5 1188 aa14.02□□□□□ -0.17
CNOT1-213ENST00000568158 UNC80Q8N2C7 3258 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 CCDC195A0A1B0GUA6 201 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 OAZ2O95190 189 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 TYMPP19971 482 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 PAX3P23760 479 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 CCNE1P24864 410 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 EDRF1Q3B7T1 1238 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 SV2CQ496J9 727 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 C1orf220Q5T0J3 134 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms