RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 C16orf86Q6ZW13 317 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 MREGQ8N565 214 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 B4GALNT2Q8NHY0 566 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
SIN3A-208ENST00000567289 RBP3P10745 1247 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 ATP4AP20648 1035 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 CHKAP35790 457 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 CRKP46108 304 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 PTDSS1P48651 473 aaKnown RBP12.34□□□□□ -0.43
SIN3A-208ENST00000567289 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
SIN3A-208ENST00000567289 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
SIN3A-208ENST00000567289 STK32AQ8WU08 396 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
SIN3A-208ENST00000567289 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 SENP1Q9P0U3 644 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 SEL1LQ9UBV2 794 aa12.34□□□□□ -0.43
SIN3A-208ENST00000567289 WEE2P0C1S8 567 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 ORC1Q13415 861 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 ECM1Q16610 540 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 RNF148Q8N7C7 305 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 DAGLBQ8NCG7 672 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.43
SIN3A-208ENST00000567289 ADPGKQ9BRR6 497 aa12.33□□□□□ -0.43
SIN3A-208ENST00000567289 UBE4BO95155 1302 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 RNF103-CHMP3A0A140T963 221 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 CSDE1O75534 798 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 FNTAP49354 379 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 BCAR1P56945 870 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 ITKQ08881 620 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 STX3Q13277 289 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 BMPR2Q13873 1038 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 ARHGEF19Q8IW93 802 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 TAS1R2Q8TE23 839 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 TMA16Q96EY4 203 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 MIS12Q9H081 205 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 KLC2Q9H0B6 622 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 C12orf65Q9H3J6 166 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 RNPEPL1Q9HAU8 725 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 SAE1Q9UBE0 346 aaPredicted RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 TCRBV7S2A1N4TA0A589 114 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 KCNN4O15554 427 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 KRT36O76013 467 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 GARSP41250 739 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 SOX10P56693 466 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 OCRLQ01968 901 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 FAM102AQ5T9C2 384 aaPredicted RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 LRRC6Q86X45 466 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 RBAKQ9NYW8 714 aaPredicted RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 NINJ2Q9NZG7 142 aa12.33□□□□□ -0.44
SIN3A-208ENST00000567289 WARS2Q9UGM6 360 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
SIN3A-208ENST00000567289 MEI4A8MW99 385 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 BANF1O75531 89 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 SLC4A1P02730 911 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 ETS1P14921 441 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 CYP11B1P15538 503 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 SNX16P57768 344 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 ZNF200P98182 395 aaPredicted RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 XRCC4Q13426 336 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 GRIK5Q16478 980 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 RNF220Q5VTB9 566 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 CNBD2Q96M20 576 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 ZNF341Q9BYN7 854 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 AGLP35573 1532 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 PTPN4P29074 926 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 NFIAQ12857 509 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 PRPSAP1Q14558 356 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 RRP1BQ14684 758 aaKnown RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 ANKRD20A4Q4UJ75 823 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 FAM182AQ5T1J6 154 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 FITM2Q8N6M3 262 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 FBXO36Q8NEA4 188 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 RASSF9O75901 435 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
SIN3A-208ENST00000567289 TFDP1Q14186 410 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 EPHA7Q15375 998 aa12.32□□□□□ -0.44
SIN3A-208ENST00000567289 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms