RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NRLP54845 237 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 SPAG1Q07617 926 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 HEATR6Q6AI08 1181 aaKnown RBP16.93■□□□□ 0.3
PALB2-205ENST00000567003 Q6ZS52 159 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 DEPDC1BQ8WUY9 529 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 KMT5AQ9NQR1 393 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 ANKFY1Q9P2R3 1169 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
PALB2-205ENST00000567003 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
PALB2-205ENST00000567003 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 SFI1A8K8P3 1242 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 SLC16A4O15374 487 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 HRO43593 1189 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
PALB2-205ENST00000567003 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.35e-6■■■□□ 14.9
PALB2-205ENST00000567003 NEK4P51957 841 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 EPHA5P54756 1037 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 MAPK7Q13164 816 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 DMP1Q13316 513 aaPredicted RBP16.92■□□□□ 0.3
PALB2-205ENST00000567003 SIM2Q14190 667 aaPredicted RBP16.92■□□□□ 0.3
PALB2-205ENST00000567003 MPZL3Q6UWV2 235 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 MFSD6LQ8IWD5 586 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 CELF5Q8N6W0 485 aaKnown RBP16.92■□□□□ 0.3
PALB2-205ENST00000567003 C8orf76Q96K31 380 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 TMEM134Q9H6X4 195 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
PALB2-205ENST00000567003 KIF26AQ9ULI4 1882 aaPredicted RBP16.91■□□□□ 0.3
PALB2-205ENST00000567003 A0A1W2PRU2 124 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 GDF9O60383 454 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 RETP07949 1114 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 ADRB1P08588 477 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 MUTP22033 750 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 CDC25AP30304 524 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 CXCL12P48061 93 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 GUCY2FP51841 1108 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 PPP2R5DQ14738 602 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 PPM1JQ5JR12 505 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 TXNDC11Q6PKC3 985 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 MAMSTRQ6ZN01 415 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 TMC8Q8IU68 726 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 APPL2Q8NEU8 664 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 ZFYVE19Q96K21 471 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 LRRC3Q9BY71 257 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 DNAJC25Q9H1X3 360 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 TRPV5Q9NQA5 729 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 SEMA4GQ9NTN9 838 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 MYH11P35749 1972 aa16.91■□□□□ 0.3
PALB2-205ENST00000567003 SLC30A4O14863 429 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 CXCL8P10145 99 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 CDR1P51861 262 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 RAD51AP2Q09MP3 1159 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 PTGDRQ13258 359 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
PALB2-205ENST00000567003 PRR23CQ6ZRP0 262 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.9■□□□□ 0.3
PALB2-205ENST00000567003 YAF2Q8IY57 180 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 LRRC3BQ96PB8 259 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 IER2Q9BTL4 223 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 HAPLN2Q9GZV7 340 aa16.9■□□□□ 0.3
PALB2-205ENST00000567003 FOXP1Q9H334 677 aaPredicted RBP16.9■□□□□ 0.3
PALB2-205ENST00000567003 ANK1P16157 1881 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 CHD6Q8TD26 2715 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 K7ESF4 209 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 SOAT2O75908 522 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.29
PALB2-205ENST00000567003 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.29
PALB2-205ENST00000567003 DUSP4Q13115 394 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 NOLC1Q14978 699 aaKnown RBP eCLIP16.89■□□□□ 0.29
PALB2-205ENST00000567003 IL17AQ16552 155 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 SPEM1Q8N4L4 309 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 TTC9BQ8N6N2 239 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
PALB2-205ENST00000567003 NUP210Q8TEM1 1887 aaPredicted RBP16.88■□□□□ 0.29
PALB2-205ENST00000567003 PPEF2O14830 753 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 YWHAHQ04917 246 aaPredicted RBP16.88■□□□□ 0.29
PALB2-205ENST00000567003 GNL2Q13823 731 aaKnown RBP16.88■□□□□ 0.29
PALB2-205ENST00000567003 LRRC32Q14392 662 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
PALB2-205ENST00000567003 ST3GAL2Q16842 350 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 LEMD2Q8NC56 503 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 GTSE1Q9NYZ3 720 aa16.88■□□□□ 0.29
PALB2-205ENST00000567003 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms