RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 LACTBL1A8MY62 500 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 M0QZQ0 153 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 OGTO15294 1046 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 NCAM2O15394 837 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 TRAK2O60296 914 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 LMNAP02545 664 aaKnown RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 LRPAP1P30533 357 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 MAGEA9P43362 315 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 TWF1Q12792 350 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 PRSS36Q5K4E3 855 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 TANGO2Q6ICL3 276 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 LEMD2Q8NC56 503 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 RAD54LQ92698 747 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 MSTO1Q9BUK6 570 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 OSBPL6Q9BZF3 934 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 HAPLN2Q9GZV7 340 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 ZFP14Q9HCL3 533 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
UBR1-206ENST00000566493 R4GN57 208 aa12.98□□□□□ -0.33
UBR1-206ENST00000566493 LAMTOR5O43504 91 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 LRRN2O75325 713 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 OAZ2O95190 189 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 SP9P0CG40 484 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 MYL4P12829 197 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 GLULP15104 373 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 PLCG1P19174 1290 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 TNFSF9P41273 254 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 PLD1Q13393 1074 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 MCM6Q14566 821 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 KARSQ15046 597 aaKnown RBP12.97□□□□□ -0.33
UBR1-206ENST00000566493 SF3A1Q15459 793 aaKnown RBP12.97□□□□□ -0.33
UBR1-206ENST00000566493 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
UBR1-206ENST00000566493 ZBTB41Q5SVQ8 909 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 ZNF852Q6ZMS4 543 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 TPRG1Q6ZUI0 275 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 CD302Q8IX05 232 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 KCNN1Q92952 543 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 TCEAL4Q96EI5 215 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 PLA2G2FQ9BZM2 168 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 BRD9Q9H8M2 597 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 LTB4R2Q9NPC1 389 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 BLOC1S4Q9NUP1 217 aa12.97□□□□□ -0.33
UBR1-206ENST00000566493 MRPS17Q9Y2R5 130 aaKnown RBP12.97□□□□□ -0.33
UBR1-206ENST00000566493 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
UBR1-206ENST00000566493 CFAP54Q96N23 3096 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
UBR1-206ENST00000566493 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 PIGRP01833 764 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 CD72P21854 359 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 PAX3P23760 479 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 ALDH1A3P47895 512 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 ZNF131P52739 623 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 FAM78AQ5JUQ0 283 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 ARMCX5Q6P1M9 558 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
UBR1-206ENST00000566493 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
UBR1-206ENST00000566493 SMARCD2Q92925 531 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 TRMT61BQ9BVS5 477 aaKnown RBP12.96□□□□□ -0.33
UBR1-206ENST00000566493 GPR88Q9GZN0 384 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 CEP72Q9P209 647 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 FBXO4Q9UKT5 387 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.33
UBR1-206ENST00000566493 VPS13AQ96RL7 3174 aa12.96□□□□□ -0.33
UBR1-206ENST00000566493 A0A0B4J269 797 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
UBR1-206ENST00000566493 OR4Q2P0C623 313 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 ODC1P11926 461 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 PDCP20941 246 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 DDIT3P35638 169 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 CCR2P41597 374 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBR1-206ENST00000566493 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 EPHB3P54753 998 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 GTF2BQ00403 316 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 GPR17Q13304 367 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 MYBPC2Q14324 1141 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 GRM2Q14416 872 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 ADALQ6DHV7 355 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 OVOS1Q6IE37 1185 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 TMEM130Q8N3G9 435 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 IRF7Q92985 503 aa12.95□□□□□ -0.34
UBR1-206ENST00000566493 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms