RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TRIOBPQ9H2D6 2365 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 TMEM265A0A087WTH1 108 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 H3BNC9 293 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 M0QZQ0 153 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 PPEF2O14830 753 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 B3GAT3O94766 335 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 KIF4AO95239 1232 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 FAM163BP0C2L3 166 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 ATICP31939 592 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 PPM1AP35813 382 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 PBX3P40426 434 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 PNPLA4P41247 253 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 KRT31Q15323 416 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 HSP90AA4PQ58FG1 418 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 LIMS2Q7Z4I7 341 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 TMEM173Q86WV6 379 aaPredicted RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 CREBRFQ8IUR6 639 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 PDCL2Q8N4E4 241 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 KLHL23Q8NBE8 558 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 LMO3Q8TAP4 145 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 RABGGTAQ92696 567 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 TAF4BQ92750 862 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
SF3B3-206ENST00000565990 XYLT2Q9H1B5 865 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 NDST4Q9H3R1 872 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 GDAP2Q9NXN4 497 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 LZTS1Q9Y250 596 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 VWA8A3KMH1 1905 aa13.58□□□□□ -0.24
SF3B3-206ENST00000565990 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 F8W810 466 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 SOX1O00570 391 aaPredicted RBP13.57□□□□□ -0.24
SF3B3-206ENST00000565990 SPTLC1O15269 473 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 CBFA2T2O43439 604 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
SF3B3-206ENST00000565990 TADA2AO75478 443 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 FGF18O76093 207 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 POLR2BP30876 1174 aaKnown RBP13.57□□□□□ -0.24
SF3B3-206ENST00000565990 MYL6P60660 151 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 NCOA4Q13772 614 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 TCERG1LQ5VWI1 586 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 FBXL13Q8NEE6 735 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 TAS1R2Q8TE23 839 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 SEMA4DQ92854 862 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 HPDLQ96IR7 371 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 FAXDC2Q96IV6 333 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 ZNF576Q9H609 170 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 CHST7Q9NS84 486 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
SF3B3-206ENST00000565990 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 PHACTR2O75167 634 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 LRRN2O75325 713 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 HLA-DRAP01903 254 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 KRT19P08727 400 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 FGFR3P22607 806 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 TAF6P49848 677 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 MXI1P50539 228 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 KRT17Q04695 432 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 UBE3AQ05086 875 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 ELAVL2Q12926 359 aaKnown RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 MYO1EQ12965 1108 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 BIRC3Q13489 604 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 TRPC3Q13507 836 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 CAMK1Q14012 370 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 PPP2R2DQ66LE6 453 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 DPY19L2P1Q6NXN4 242 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 DPH6Q7L8W6 267 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 TAS1R1Q7RTX1 841 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
SF3B3-206ENST00000565990 C11orf84Q9BUA3 381 aaPredicted RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 PRG3Q9Y2Y8 225 aaPredicted RBP13.56□□□□□ -0.24
SF3B3-206ENST00000565990 LILRB3O75022 631 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 CTNNB1P35222 781 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
SF3B3-206ENST00000565990 KCNMA1Q12791 1236 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 CETN1Q12798 172 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 MRPL58Q14197 206 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms