RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CRTAC1Q9NQ79 661 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 INCENPQ9NQS7 918 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 SAMD15Q9P1V8 674 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 CPA4Q9UI42 421 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 TMED5Q9Y3A6 229 aa3.3□□□□□ -1.88
CHD9-216ENST00000565803 RAB3GAP2Q9H2M9 1393 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 A0A087WZG4 1122 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 A0A0B4J269 797 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 A0A0U1RQK1 487 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 A0A1W2PQH9 124 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZNF320A2RRD8 509 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 RGSL1A5PLK6 1076 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 KHNYNO15037 678 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SCAMP1O15126 338 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 FFAR2O15552 330 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 GMFGO60234 142 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MTX2O75431 263 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 RPS6KA4O75676 772 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 GJB3O75712 270 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 S100A9P06702 114 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 CYP2A6P11509 494 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ARF4P18085 180 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ALAS2P22557 587 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TXLNAP40222 546 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TPM4P67936 248 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MC1RQ01726 317 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ITIH3Q06033 890 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 RALGDSQ12967 914 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SCARB2Q14108 478 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ARHGEF6Q15052 776 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZSCAN26Q16670 478 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ADCK5Q3MIX3 580 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PREPLQ4J6C6 727 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SLC10A5Q5PT55 438 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CRELD2Q6UXH1 353 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 GPR149Q86SP6 731 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LRRTM4Q86VH4 590 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TRIM42Q8IWZ5 723 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TUSC5Q8IXB3 177 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZNF606Q8WXB4 792 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 DIO2Q92813 273 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 NACC2Q96BF6 587 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 EFHD2Q96C19 240 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 DHRS1Q96LJ7 313 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TEKT5Q96M29 485 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 DDX50Q9BQ39 737 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 THUMPD3Q9BV44 507 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SENP6Q9GZR1 1112 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 AP5M1Q9H0R1 490 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MAGEH1Q9H213 219 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 VPS16Q9H269 839 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 VEZTQ9HBM0 779 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PNPLA8Q9NP80 782 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CHORDC1Q9UHD1 332 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZNF112Q9UJU3 913 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SNX6Q9UNH7 406 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ATP8B3O60423 1300 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 A0A0G2JLW4 131 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 HNRNPCL2B2RXH8 293 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 NT5C1B-RDH14C9J2C7 533 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 HOXC11O43248 304 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SMPD2O60906 423 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MAFO75444 373 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ERLIN1O75477 346 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 GLRX3O76003 335 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 RPSAP08865 295 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 HOXC12P31275 282 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 EPHX2P34913 555 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 IDUAP35475 653 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 EIF2DP41214 584 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 OLR1P78380 273 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ASPHQ12797 758 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CETN1Q12798 172 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MTX1Q13505 466 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PMS2P11Q13670 270 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MAP7Q14244 749 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZYXQ15942 572 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ATP2B3Q16720 1220 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 RPS26P11Q5JNZ5 115 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SH2D4BQ5SQS7 431 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 NAA16Q6N069 864 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 XKR5Q6UX68 686 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ATG14Q6ZNE5 492 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 R3HCC1LQ7Z5L2 792 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 BPHLQ86WA6 291 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZC3H7AQ8IWR0 971 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 SH2D3CQ8N5H7 860 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LINC00116Q8NCU8 138 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CCHCR1Q8TD31 782 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ASAP3Q8TDY4 903 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 COG3Q96JB2 828 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TRERF1Q96PN7 1200 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CITED2Q99967 270 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 TACO1Q9BSH4 297 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 HGH1Q9BTY7 390 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TTLL2Q9BWV7 592 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 KLHL4Q9C0H6 718 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 GLT8D2Q9H1C3 349 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 VCX3BQ9H321 246 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 COPS7BQ9H9Q2 264 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms