RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SLC23A1Q9UHI7 598 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 L1RE1Q9UN81 338 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 PCDHGB6Q9Y5F9 930 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 A0A088AWK7 358 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 CFAP69A5D8W1 941 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 CXorf49A8MYA2 514 aaPredicted RBP5.61□□□□□ -1.51
CHD9-215ENST00000565442 TEX33O43247 280 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 CD1AP06126 327 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 TYRP14679 529 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 CREMQ03060 361 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 CNN3Q15417 329 aaKnown RBP5.61□□□□□ -1.51
CHD9-215ENST00000565442 SAFBQ15424 915 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD9-215ENST00000565442 FLYWCH1Q4VC44 716 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 SYCP2LQ5T4T6 812 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 SWSAP1Q6NVH7 229 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 KCNV1Q6PIU1 500 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 LRRC55Q6ZSA7 311 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 HTR3DQ70Z44 454 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 PLXDC1Q8IUK5 500 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 C11orf54Q9H0W9 315 aaPredicted RBP5.61□□□□□ -1.51
CHD9-215ENST00000565442 BHMT2Q9H2M3 363 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 TOR3AQ9H497 397 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 PNPOQ9NVS9 261 aa5.61□□□□□ -1.51
CHD9-215ENST00000565442 TCRBV7S2A1N4TA0A589 114 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 GOLGA6L6A8MZA4 724 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 F2RL2O00254 374 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 GRM6O15303 877 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 PPFIA4O75335 1185 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 ARIH2O95376 493 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 HRGP04196 525 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 SBK3P0C264 359 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 NBPF7P0C2Y1 421 aaPredicted RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 CDK4P11802 303 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 ITGB6P18564 788 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 ATP5JP18859 108 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 NR4A1P22736 598 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 RAP2BP61225 183 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 FGL2Q14314 439 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 HECTD2Q5U5R9 776 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 RNF220Q5VTB9 566 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 IL31Q6EBC2 164 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 ZNF529Q6P280 563 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 DARS2Q6PI48 645 aaKnown RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 OLFML1Q6UWY5 402 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 UBE3BQ7Z3V4 1068 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 ELOA2Q8IYF1 753 aaPredicted RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 FAM43AQ8N2R8 423 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 MTFMTQ96DP5 389 aaKnown RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 MNTQ99583 582 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 CPPED1Q9BRF8 314 aaPredicted RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 APOL5Q9BWW9 433 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 LSM14BQ9BX40 385 aaKnown RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 SYNPO2LQ9H987 977 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 FEZ2Q9UHY8 353 aaPredicted RBP5.6□□□□□ -1.51
CHD9-215ENST00000565442 CPA4Q9UI42 421 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 PCDHA1Q9Y5I3 950 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 HS3ST4Q9Y661 456 aa5.6□□□□□ -1.51
CHD9-215ENST00000565442 PNPLA7Q6ZV29 1317 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 B5MCH6 92 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 NT5C1B-RDH14C9J2C7 533 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 PEX14O75381 377 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 PRDX5P30044 214 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 NEK3P51956 506 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 CLRN1P58418 232 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 FAM193AP78312 1265 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 UBE4AQ14139 1066 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 ATP2B3Q16720 1220 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 PAPD7Q5XG87 772 aaKnown RBP5.59□□□□□ -1.51
CHD9-215ENST00000565442 OTUD7BQ6GQQ9 843 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 MAEAQ7L5Y9 396 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 PPP1R3BQ86XI6 285 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
CHD9-215ENST00000565442 ATXN2LQ8WWM7 1075 aaKnown RBP5.59□□□□□ -1.51
CHD9-215ENST00000565442 FAM167AQ96KS9 214 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 ZMAT3Q9HA38 289 aaKnown RBP5.59□□□□□ -1.51
CHD9-215ENST00000565442 SLAMF7Q9NQ25 335 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 USP25Q9UHP3 1055 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 PCDHA6Q9UN73 950 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 HDAC5Q9UQL6 1122 aa5.59□□□□□ -1.51
CHD9-215ENST00000565442 TBKBP1A7MCY6 615 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 GRXCR1A8MXD5 290 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 GOLIM4O00461 696 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 PMM2O15305 246 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 AHSGP02765 367 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 SNRPA1P09661 255 aaKnown RBP5.58□□□□□ -1.52
CHD9-215ENST00000565442 GNAT2P19087 354 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 PEX2P28328 305 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 PHKA1P46020 1223 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 CACNB3P54284 484 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 GPSM2P81274 684 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 PICALMQ13492 652 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 SEMA5AQ13591 1074 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 BMT2Q1RMZ1 405 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 PABPC1LQ4VXU2 614 aaKnown RBP5.58□□□□□ -1.52
CHD9-215ENST00000565442 DACT2Q5SW24 774 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 C1QL3Q5VWW1 255 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms