RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FAM213AQ9BRX8 229 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ASCC2Q9H1I8 757 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 VPS18Q9P253 973 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GTF3C4Q9UKN8 822 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 AGTPBP1Q9UPW5 1226 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 NOC2LQ9Y3T9 749 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ALG6Q9Y672 507 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 AGPSO00116 658 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 RAD51CO43502 376 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 C4BPAP04003 597 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 CYP1A2P05177 515 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 DLATP10515 647 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 USP8P40818 1118 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 FMO1Q01740 532 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PPIL2Q13356 520 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 ZACNQ401N2 412 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 IER5Q5VY09 327 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PPP1R2P3Q6NXS1 205 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 ZPBP2Q6X784 338 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GADL1Q6ZQY3 521 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 USP50Q70EL3 339 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PLPPR4Q7Z2D5 763 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PALB2Q86YC2 1186 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TNS4Q8IZW8 715 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TCP11Q8WWU5 503 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SEC14L1Q92503 715 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 POP1Q99575 1024 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 JPH2Q9BR39 696 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 WNT8AQ9H1J5 351 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLPH3Q9H4A6 298 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TAF1DQ9H5J8 278 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 AZI2Q9H6S1 392 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SPON1Q9HCB6 807 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 CTTNBP2NLQ9P2B4 639 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 LRFN2Q9ULH4 789 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 COLQQ9Y215 455 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TELO2Q9Y4R8 837 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PCDHB2Q9Y5E7 798 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PAPPA2Q9BXP8 1791 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 A0A0B4J269 797 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6L10A0A0M3HER8 536 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 CCDC66A2RUB6 948 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA8KD6RF30 607 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 ADCY3O60266 1144 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 HSF2BPO75031 334 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 RNF40O75150 1001 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GGPS1O95749 300 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 BPNT1O95861 308 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SCGB1D2O95969 90 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TNNI1P19237 187 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GGCXP38435 758 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 CARSP49589 748 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SLC26A2P50443 739 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 RNASE9P60153 205 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 FSTL1Q12841 308 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PPFIA1Q13136 1202 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 GRM1Q13255 1194 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 MXD4Q14582 209 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 ACAD10Q6JQN1 1059 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SLC47A2Q86VL8 602 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 C1orf131Q8NDD1 294 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 DDX1Q92499 740 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 KAT5Q92993 513 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 TMEM143Q96AN5 459 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PCDHB18PQ96TA0 734 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 PCYT2Q99447 389 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 SH3GL2Q99962 352 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 C1orf112Q9NSG2 853 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 COG5Q9UP83 839 aa7.76□□□□□ -1.17
HERPUD1-209ENST00000564678 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 LRRIQ4A6NIV6 560 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 A6NNZ2 444 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 IFRD1O00458 451 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 GRIN3BO60391 1043 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 CNMDO75829 334 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 FGGP02679 453 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 MMEP08473 750 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 MYBL1P10243 752 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 TCF7P36402 384 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 SURF1Q15526 300 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 TUBB8Q3ZCM7 444 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 CRELD2Q6UXH1 353 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 CD302Q8IX05 232 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 KLHL7Q8IXQ5 586 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 GSPT2Q8IYD1 628 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 IQCKQ8N0W5 287 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 PIP4P2Q8N4L2 257 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 CASKIN2Q8WXE0 1202 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 IFT81Q8WYA0 676 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 ZNF516Q92618 1163 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 TRIM11Q96F44 468 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 SEC16BQ96JE7 1060 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 TSPAN10Q9H1Z9 355 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 MROH8Q9H579 483 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 ELP3Q9H9T3 547 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms