RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 GDPD2Q9HCC8 539 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 PANK4Q9NVE7 773 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 FBXO4Q9UKT5 387 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 GDAQ9Y2T3 454 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 DOCK6Q96HP0 2047 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 VWA8A3KMH1 1905 aa20.59■□□□□ 0.89
NME3-207ENST00000564628 HNRNPDLO14979 420 aaKnown RBP20.58■□□□□ 0.89
NME3-207ENST00000564628 SLFN14P0C7P3 912 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 OR1D2P34982 312 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 MAGEA9P43362 315 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 CCDC65Q8IXS2 484 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 KIAA2013Q8IYS2 634 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 UROC1Q96N76 676 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 PPP1R10Q96QC0 940 aaKnown RBP20.58■□□□□ 0.89
NME3-207ENST00000564628 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 FGFBP2Q9BYJ0 223 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
NME3-207ENST00000564628 ANKFY1Q9P2R3 1169 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 USP25Q9UHP3 1055 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 BACE2Q9Y5Z0 518 aa20.58■□□□□ 0.89
NME3-207ENST00000564628 MIA3Q5JRA6 1907 aa20.58■□□□□ 0.88
NME3-207ENST00000564628 DMXL1Q9Y485 3027 aa20.58■□□□□ 0.88
NME3-207ENST00000564628 OTOGLQ3ZCN5 2332 aa20.58■□□□□ 0.88
NME3-207ENST00000564628 CLDN3O15551 220 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 MEFVO15553 781 aaPredicted RBP20.57■□□□□ 0.88
NME3-207ENST00000564628 FAM189A1O60320 539 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 KINO60870 393 aaKnown RBP20.57■□□□□ 0.88
NME3-207ENST00000564628 LRRN2O75325 713 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 B3GAT3O94766 335 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 LIG4P49917 911 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 CASP5P51878 434 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 EHHADHQ08426 723 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 ALCAMQ13740 583 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 PABPC1LQ4VXU2 614 aaKnown RBP20.57■□□□□ 0.88
NME3-207ENST00000564628 ALKAL1Q6UXT8 129 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 SUMF1Q8NBK3 374 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 BICD1Q96G01 975 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 HINFPQ9BQA5 517 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
NME3-207ENST00000564628 DNMT3BQ9UBC3 853 aaKnown RBP20.57■□□□□ 0.88
NME3-207ENST00000564628 SERTAD1Q9UHV2 236 aa20.57■□□□□ 0.88
NME3-207ENST00000564628 CACNA1IQ9P0X4 2223 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 TRAPPC3O43617 180 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 NDUFA8P51970 172 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 ASIC1P78348 528 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 PUM1Q14671 1186 aaKnown RBP eCLIP20.56■□□□□ 0.88
NME3-207ENST00000564628 UPP1Q16831 310 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 ANKS3Q6ZW76 656 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 FSIP1Q8NA03 581 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 GOLPH3LQ9H4A5 285 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 LTB4R2Q9NPC1 389 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 AVENQ9NQS1 362 aaPredicted RBP20.56■□□□□ 0.88
NME3-207ENST00000564628 TOPORSQ9NS56 1045 aaPredicted RBP20.56■□□□□ 0.88
NME3-207ENST00000564628 SPATA6Q9NWH7 488 aaPredicted RBP20.56■□□□□ 0.88
NME3-207ENST00000564628 HCFC1R1Q9NWW0 138 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 GDE1Q9NZC3 331 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 TBC1D7Q9P0N9 293 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 CDY1Q9Y6F8 540 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 STYXL1Q9Y6J8 313 aa20.56■□□□□ 0.88
NME3-207ENST00000564628 A0A0B4J269 797 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 SPTLC1O15269 473 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 LAMTOR5O43504 91 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 ECI2O75521 394 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 CASP1P29466 404 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 SYKP43405 635 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 CLCNKBP51801 687 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 KCNA1Q09470 495 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 UBXN2BQ14CS0 331 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
NME3-207ENST00000564628 CD300LGQ6UXG3 332 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 UNC13DQ70J99 1090 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 DGLUCYQ7Z3D6 616 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 CEP57L1Q8IYX8 460 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 PAGE5Q96GU1 130 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 ACAP3Q96P50 834 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 NELL2Q99435 816 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 KXD1Q9BQD3 176 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 MRPS23Q9Y3D9 190 aaKnown RBP20.55■□□□□ 0.88
NME3-207ENST00000564628 MTF2Q9Y483 593 aaPredicted RBP20.55■□□□□ 0.88
NME3-207ENST00000564628 FRYLO94915 3013 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 PATJQ8NI35 1801 aa20.55■□□□□ 0.88
NME3-207ENST00000564628 NOTCH4Q99466 2003 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 FAM170BA6NMN3 283 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 ANKRD63C9JTQ0 380 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 GCNT3O95395 438 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 HARSP12081 509 aaKnown RBP20.54■□□□□ 0.88
NME3-207ENST00000564628 KCNE1P15382 129 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 YARSP54577 528 aaKnown RBP20.54■□□□□ 0.88
NME3-207ENST00000564628 OSTNP61366 133 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 CUL4BQ13620 913 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 GLRA4Q5JXX5 417 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 GRAMD1CQ8IYS0 662 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 ZNF461Q8TAF7 563 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 DDX27Q96GQ7 796 aaKnown RBP20.54■□□□□ 0.88
NME3-207ENST00000564628 BLZF1Q9H2G9 400 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 IKZF4Q9H2S9 585 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 DLL3Q9NYJ7 618 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 CNTN3Q9P232 1028 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 PCDHB13Q9Y5F0 798 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms