RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SGTAO43765 313 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 ESRRBO95718 433 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 GATA3P23771 443 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 SLC16A1P53985 500 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 KRT85P78386 507 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 MC2RQ01718 297 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 SNAPC2Q13487 334 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 SPDYE7PQ495Y7 208 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 KHDC1Q4VXA5 237 aaKnown RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 PABPC1LQ4VXU2 614 aaKnown RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 PRR16Q569H4 304 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 BRDTQ58F21 947 aaPredicted RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 EFCAB2Q5VUJ9 269 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 NSUN6Q8TEA1 469 aaKnown RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 FBXO41Q8TF61 875 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 PNKPQ96T60 521 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 VKORC1Q9BQB6 163 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 SLC13A1Q9BZW2 595 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 REXO4Q9GZR2 422 aaKnown RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 CTTNBP2NLQ9P2B4 639 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
CHD9-211ENST00000564600 CDYLQ9Y232 598 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 ALG1L2C9J202 215 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 NT5C1B-RDH14C9J2C7 533 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 F2RL2O00254 374 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 SLC43A1O75387 559 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 ERN1O75460 977 aaKnown RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 MATN4O95460 622 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 AVPR1BP47901 424 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 ADKP55263 362 aaKnown RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 SIM1P81133 766 aaPredicted RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 MPP3Q13368 585 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 CD300EQ496F6 205 aaPredicted RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 Q6ZNX1 250 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 TSHZ1Q6ZSZ6 1077 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 ARHGEF25Q86VW2 580 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 FAM43AQ8N2R8 423 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 SSH3Q8TE77 659 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 PTCD3Q96EY7 689 aaKnown RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 SPATA5L1Q9BVQ7 753 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 JKAMPQ9P055 326 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 FOXJ2Q9P0K8 574 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.03□□□□□ -1.76
CHD9-211ENST00000564600 INSL6Q9Y581 213 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 MRFAP1Q9Y605 127 aa4.03□□□□□ -1.76
CHD9-211ENST00000564600 SUN1O94901 812 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 MALP21145 153 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 ABCG1P45844 678 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 PHKA1P46020 1223 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 ZNF169Q14929 603 aaPredicted RBP4.02□□□□□ -1.77
CHD9-211ENST00000564600 SF3B3Q15393 1217 aaKnown RBP4.02□□□□□ -1.77
CHD9-211ENST00000564600 ARMC6Q6NXE6 501 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 FOXR2Q6PJQ5 311 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 ZNF365Q70YC5 407 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 TMPRSS9Q7Z410 1059 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 CATIPQ7Z7H3 387 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 LNX2Q8N448 690 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 PDPRQ8NCN5 879 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 SLC17A8Q8NDX2 589 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 NLGN4YQ8NFZ3 816 aaPredicted RBP4.02□□□□□ -1.77
CHD9-211ENST00000564600 TMEM125Q96AQ2 219 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 AIFM2Q9BRQ8 373 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 C1orf43Q9BWL3 253 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 IMPG2Q9BZV3 1241 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 CASS4Q9NQ75 786 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 TBCCD1Q9NVR7 557 aa4.02□□□□□ -1.77
CHD9-211ENST00000564600 ELFN1P0C7U0 828 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 MTHFD1P11586 935 aaKnown RBP4.01□□□□□ -1.77
CHD9-211ENST00000564600 LPOP22079 712 aaPredicted RBP4.01□□□□□ -1.77
CHD9-211ENST00000564600 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD9-211ENST00000564600 RAB39AQ14964 217 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 PTPROQ16827 1216 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 GADL1Q6ZQY3 521 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 CFAP52Q8N1V2 620 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 PRR18Q8N4B5 295 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 SLC30A5Q8TAD4 765 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 ZNF384Q8TF68 577 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 LPIN2Q92539 896 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 PACSIN1Q9BY11 444 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 SLC29A3Q9BZD2 475 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 KCTD5Q9NXV2 234 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 AGAP1Q9UPQ3 857 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 PCDHA3Q9Y5H8 950 aa4.01□□□□□ -1.77
CHD9-211ENST00000564600 COL3A1P02461 1466 aaPredicted RBP4□□□□□ -1.77
CHD9-211ENST00000564600 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
CHD9-211ENST00000564600 PRAMEF33A0A0G2JMD5 474 aa4□□□□□ -1.77
CHD9-211ENST00000564600 A0A1W2PS29 197 aa4□□□□□ -1.77
CHD9-211ENST00000564600 DNAJC9-AS1A6NH13 148 aa4□□□□□ -1.77
CHD9-211ENST00000564600 LRRC3CA6NJW4 275 aa4□□□□□ -1.77
CHD9-211ENST00000564600 VWC2LB2RUY7 222 aa4□□□□□ -1.77
CHD9-211ENST00000564600 PRAMEF10O60809 474 aa4□□□□□ -1.77
CHD9-211ENST00000564600 C1QL1O75973 258 aa4□□□□□ -1.77
CHD9-211ENST00000564600 IGLV2-14P01704 120 aa4□□□□□ -1.77
CHD9-211ENST00000564600 KCNA2P16389 499 aa4□□□□□ -1.77
CHD9-211ENST00000564600 PDCP20941 246 aa4□□□□□ -1.77
CHD9-211ENST00000564600 CCND1P24385 295 aa4□□□□□ -1.77
CHD9-211ENST00000564600 PSMC1P62191 440 aaKnown RBP4□□□□□ -1.77
CHD9-211ENST00000564600 BLOC1S1P78537 153 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms