RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 LRRC52Q8N7C0 313 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 TPCN2Q8NHX9 752 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 PCDHB18PQ96TA0 734 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 CARD6Q9BX69 1037 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 EIF2AQ9BY44 585 aaKnown RBP16.63■□□□□ 0.25
COMMD4-210ENST00000564587 SENP6Q9GZR1 1112 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-210ENST00000564587 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 CISHQ9NSE2 258 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 GTF3C4Q9UKN8 822 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 SNX12Q9UMY4 172 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 NOC2LQ9Y3T9 749 aaKnown RBP16.63■□□□□ 0.25
COMMD4-210ENST00000564587 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 MEFVO15553 781 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-210ENST00000564587 MED7O43513 233 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 MTA2O94776 668 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-210ENST00000564587 PAEPP09466 180 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 KCNE1P15382 129 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 ASPAP45381 313 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 MGAT3Q09327 533 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 ZBTB6Q15916 424 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 WDR72Q3MJ13 1102 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 FAM26DQ5JW98 314 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
COMMD4-210ENST00000564587 SLFN11Q7Z7L1 901 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 CXorf38Q8TB03 319 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 UBXN4Q92575 508 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 HPDLQ96IR7 371 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 UVRAGQ9P2Y5 699 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 AGAP1Q9UPQ3 857 aa16.62■□□□□ 0.25
COMMD4-210ENST00000564587 CTAGE15A4D2H0 777 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 GRID2IPA4D2P6 1211 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 CES2O00748 559 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 ENC1O14682 589 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 TLR3O15455 904 aaKnown RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 RECQL4O94761 1208 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 LSM8O95777 96 aaKnown RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 CYP1A1P04798 512 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 CTAGE8P0CG41 777 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 ZSCAN20P17040 1043 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 ABCB4P21439 1286 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 POLR2BP30876 1174 aaKnown RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 PNPLA4P41247 253 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 RAB27AP51159 221 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 TNNC1P63316 161 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 MEI1Q5TIA1 1274 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 CTAGE6Q86UF2 777 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 CTAGE4Q8IX94 777 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 GOLGA1Q92805 767 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 AVENQ9NQS1 362 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
COMMD4-210ENST00000564587 KIAA1257Q9ULG3 409 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 ST3GAL5Q9UNP4 418 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
COMMD4-210ENST00000564587 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-210ENST00000564587 THAP12O43422 761 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 TADA3O75528 432 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 CHRNA1P02708 482 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 CYP1A2P05177 515 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 SKIP12755 728 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 THPOP40225 353 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 NSFP46459 744 aaKnown RBP16.6■□□□□ 0.25
COMMD4-210ENST00000564587 CENPCQ03188 943 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 RPS6KA1Q15418 735 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 LHX8Q68G74 356 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 LRRC57Q8N9N7 239 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 ZNF606Q8WXB4 792 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 TRAIPQ9BWF2 469 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 TLR10Q9BXR5 811 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 THAP2Q9H0W7 228 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 NXF3Q9H4D5 531 aaKnown RBP16.6■□□□□ 0.25
COMMD4-210ENST00000564587 TAS2R14Q9NYV8 317 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 CTTNBP2NLQ9P2B4 639 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 PCDHGC3Q9UN70 934 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 IPPQ9Y573 584 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
COMMD4-210ENST00000564587 KBTBD13C9JR72 458 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PAFAH1B1P43034 410 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 ITIH3Q06033 890 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 C11orf63Q6NUN7 778 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PEX26Q7Z412 305 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PHF13Q86YI8 300 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-210ENST00000564587 SLC43A3Q8NBI5 491 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms