RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ARNTLO00327 626 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 OAZ2O95190 189 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 NEFLP07196 543 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 MAPTP10636 758 aaKnown RBP15.37■□□□□ 0.05
CDR2-204ENST00000564542 PLS3P13797 630 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
CDR2-204ENST00000564542 CDC25AP30304 524 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 VIPR2P41587 438 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 CCR3P51677 355 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 SMTNP53814 917 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 ARHGAP8P85298 464 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 YWHAHQ04917 246 aaPredicted RBP15.37■□□□□ 0.05
CDR2-204ENST00000564542 MCL1Q07820 350 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 PLD1Q13393 1074 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 IL17AQ16552 155 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 SEZ6Q53EL9 994 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 E2F7Q96AV8 911 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 ZSCAN31Q96LW9 406 aaPredicted RBP15.37■□□□□ 0.05
CDR2-204ENST00000564542 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 PLEKHA5Q9HAU0 1116 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
CDR2-204ENST00000564542 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 F5P12259 2224 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 NCANO14594 1321 aa15.37■□□□□ 0.05
CDR2-204ENST00000564542 SFI1A8K8P3 1242 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 ZNF263O14978 683 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 CLDN3O15551 220 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 CXCL8P10145 99 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 GJA1P17302 382 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 TGM1P22735 817 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 LRPAP1P30533 357 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
CDR2-204ENST00000564542 TEAD2Q15562 447 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 C1orf228Q6PIY5 440 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 MFSD6LQ8IWD5 586 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 KCTD17Q8N5Z5 321 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 SHKBP1Q8TBC3 707 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 MSANTD3Q96H12 275 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 SLITRK6Q9H5Y7 841 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 LMAN1LQ9HAT1 526 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 KCND2Q9NZV8 630 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 CDV3Q9UKY7 258 aaKnown RBP15.36■□□□□ 0.05
CDR2-204ENST00000564542 USP18Q9UMW8 372 aa15.36■□□□□ 0.05
CDR2-204ENST00000564542 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 HEPACAM2A8MVW5 462 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 SEC24BO95487 1268 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 VNN2O95498 520 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 CHRNB1P11230 501 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 CYP3A5P20815 502 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 AARSP49588 968 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDR2-204ENST00000564542 ATXN1P54253 815 aaKnown RBP15.35■□□□□ 0.05
CDR2-204ENST00000564542 RAD51AP2Q09MP3 1159 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 HYIQ5T013 277 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 TMC8Q8IU68 726 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 SYT2Q8N9I0 419 aaPredicted RBP15.35■□□□□ 0.05
CDR2-204ENST00000564542 LRRC3Q9BY71 257 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.35■□□□□ 0.05
CDR2-204ENST00000564542 RAB23Q9ULC3 237 aa15.35■□□□□ 0.05
CDR2-204ENST00000564542 UBQLN1Q9UMX0 589 aaKnown RBP15.35■□□□□ 0.05
CDR2-204ENST00000564542 TSC2P49815 1807 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 NUP210Q8TEM1 1887 aaPredicted RBP15.34■□□□□ 0.05
CDR2-204ENST00000564542 A0A1W2PRU2 124 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 OR6C75A6NL08 312 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 H0YCG3 227 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 CLTAP09496 248 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 OR4Q2P0C623 313 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 CCNE1P24864 410 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 MATR3P43243 847 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDR2-204ENST00000564542 EPHB3P54753 998 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 PPP2R3AQ06190 1150 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 SPAG1Q07617 926 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 FCHO2Q0JRZ9 810 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 GPR17Q13304 367 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
CDR2-204ENST00000564542 ZBTB6Q15916 424 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 LAIR1Q6GTX8 287 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 USP37Q86T82 979 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 TMEM130Q8N3G9 435 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 CELF5Q8N6W0 485 aaKnown RBP15.34■□□□□ 0.05
CDR2-204ENST00000564542 CSGALNACT1Q8TDX6 532 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 KCNN1Q92952 543 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 RSPRY1Q96DX4 576 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 KIF12Q96FN5 646 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 PNMA5Q96PV4 448 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 RTKNQ9BST9 563 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 HAPLN2Q9GZV7 340 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 DNAJC25Q9H1X3 360 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 CRISPLD1Q9H336 500 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 PARD6AQ9NPB6 346 aa15.34■□□□□ 0.05
CDR2-204ENST00000564542 TIMM13Q9Y5L4 95 aaPredicted RBP15.34■□□□□ 0.05
CDR2-204ENST00000564542 CHADO15335 359 aa15.33■□□□□ 0.04
CDR2-204ENST00000564542 XPOTO43592 962 aaKnown RBP15.33■□□□□ 0.04
CDR2-204ENST00000564542 CXCL12P48061 93 aa15.33■□□□□ 0.04
CDR2-204ENST00000564542 SLC12A3P55017 1021 aa15.33■□□□□ 0.04
CDR2-204ENST00000564542 NCKAP1LP55160 1127 aa15.33■□□□□ 0.04
CDR2-204ENST00000564542 ATP2C1P98194 919 aaPredicted RBP15.33■□□□□ 0.04
CDR2-204ENST00000564542 SATB1Q01826 763 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms