RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TGM5O43548 720 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 CYP11A1P05108 521 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 RPL17P18621 184 aaKnown RBP18.69■□□□□ 0.58
USB1-209ENST00000564387 TYMPP19971 482 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 PNPLA4P41247 253 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 ENPEPQ07075 957 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 MORC3Q14149 939 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 SMAD2Q15796 467 aaKnown RBP18.69■□□□□ 0.58
USB1-209ENST00000564387 DUOXA2Q1HG44 320 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 SCARA3Q6AZY7 606 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 ZC3H3Q8IXZ2 948 aaKnown RBP18.69■□□□□ 0.58
USB1-209ENST00000564387 LRRC52Q8N7C0 313 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 PLEKHO2Q8TD55 490 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 PARD3BQ8TEW8 1205 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 CGRRF1Q99675 332 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 RHOBTB2Q9BYZ6 727 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 C5orf42Q9H799 3197 aa18.69■□□□□ 0.58
USB1-209ENST00000564387 MTCL1Q9Y4B5 1905 aaKnown RBP18.68■□□□□ 0.58
USB1-209ENST00000564387 GLUD1P00367 558 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 CASP4P49662 377 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 TAF6P49848 677 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 ITIH3Q06033 890 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 FOXR2Q6PJQ5 311 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 CMASQ8NFW8 434 aaPredicted RBP18.68■□□□□ 0.58
USB1-209ENST00000564387 TMC2Q8TDI7 906 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 NOC3LQ8WTT2 800 aaKnown RBP18.68■□□□□ 0.58
USB1-209ENST00000564387 ZNF516Q92618 1163 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 SENP8Q96LD8 212 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 GBP4Q96PP9 640 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 OXCT2Q9BYC2 517 aaPredicted RBP18.68■□□□□ 0.58
USB1-209ENST00000564387 MTMR12Q9C0I1 747 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 ADAM7Q9H2U9 754 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 DPP7Q9UHL4 492 aa18.68■□□□□ 0.58
USB1-209ENST00000564387 KPNA7A9QM74 516 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 H7C4K7 107 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 ABLIM3O94929 683 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 ITGB3P05106 788 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 TMEM191BP0C7N4 346 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 NR2F2P24468 414 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 RPL13P26373 211 aaKnown RBP18.67■□□□□ 0.58
USB1-209ENST00000564387 POLR2BP30876 1174 aaKnown RBP18.67■□□□□ 0.58
USB1-209ENST00000564387 OR1D2P34982 312 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 PPP1R2P41236 205 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 RBP5P82980 135 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 RTL10Q7L3V2 364 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 LIMS2Q7Z4I7 341 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 ANKRD36BP1Q96IX9 119 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 FAM84AQ96KN4 292 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 ZNF560Q96MR9 790 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 POP1Q99575 1024 aaKnown RBP18.67■□□□□ 0.58
USB1-209ENST00000564387 GDAP2Q9NXN4 497 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 FBXL5Q9UKA1 691 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 FBXW11Q9UKB1 542 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 AGAP1Q9UPQ3 857 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 FAM50BQ9Y247 325 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 CDY1Q9Y6F8 540 aa18.67■□□□□ 0.58
USB1-209ENST00000564387 TSC2P49815 1807 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 ARHGEF37A1IGU5 675 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 PPP1R3GB7ZBB8 358 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 AKAP3O75969 853 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 IL9P15248 144 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 CD44P16070 742 aaKnown RBP18.66■□□□□ 0.58
USB1-209ENST00000564387 AP3M2P53677 418 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 YWHAHQ04917 246 aaPredicted RBP18.66■□□□□ 0.58
USB1-209ENST00000564387 CLUL1Q15846 466 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 SV2CQ496J9 727 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 LMBRD2Q68DH5 695 aaPredicted RBP18.66■□□□□ 0.58
USB1-209ENST00000564387 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 DSTYKQ6XUX3 929 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 PALB2Q86YC2 1186 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 TRIML1Q8N9V2 468 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 CCDC127Q96BQ5 260 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
USB1-209ENST00000564387 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 MKNK1Q9BUB5 465 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 SFXN1Q9H9B4 322 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 MAN1C1Q9NR34 630 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 PRKAG3Q9UGI9 489 aa18.66■□□□□ 0.58
USB1-209ENST00000564387 USP15Q9Y4E8 981 aaPredicted RBP18.66■□□□□ 0.58
USB1-209ENST00000564387 IKBKBO14920 756 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 TNNC2P02585 160 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
USB1-209ENST00000564387 ODC1P11926 461 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 CCNE1P24864 410 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 PMS1P54277 932 aaKnown RBP18.65■□□□□ 0.58
USB1-209ENST00000564387 LRRC63Q05C16 580 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 ADAM9Q13443 819 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 CTXN3Q4LDR2 81 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 C1orf220Q5T0J3 134 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 ZNF280DQ6N043 979 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 ELMSAN1Q6PJG2 1045 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 C15orf39Q6ZRI6 1047 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 GPR149Q86SP6 731 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 KREMEN2Q8NCW0 462 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms