RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PRKG1Q13976 671 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 C1orf228Q6PIY5 440 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 ALKBH8Q96BT7 664 aaKnown RBP13.27□□□□□ -0.28
COMMD4-209ENST00000564068 ATXN7L3BQ96GX2 97 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 ERVK-5Q9HDB9 667 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.28
COMMD4-209ENST00000564068 APRTP07741 180 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF200P98182 395 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-209ENST00000564068 MRPL46Q9H2W6 279 aaKnown RBP13.27□□□□□ -0.29
COMMD4-209ENST00000564068 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 MTFR1Q15390 333 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 TTC8Q8TAM2 541 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 EFHD1Q9BUP0 239 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 TRPV6Q9H1D0 765 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 ADA2Q9NZK5 511 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 HESX1Q9UBX0 185 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 XPO7Q9UIA9 1087 aaKnown RBP13.27□□□□□ -0.29
COMMD4-209ENST00000564068 TLK1Q9UKI8 766 aa13.27□□□□□ -0.29
COMMD4-209ENST00000564068 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 MSH4O15457 936 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 ACOT2P49753 483 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 WASHC2DQ5SRD0 308 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 FITM2Q8N6M3 262 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 DHX38Q92620 1227 aaKnown RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 DNAJC19Q96DA6 116 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 MCEEQ96PE7 176 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 FGFBP2Q9BYJ0 223 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■■□□□ 14.4
COMMD4-209ENST00000564068 INO80B-WBP1J3KQ70 363 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CST8O60676 142 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 WEE2P0C1S8 567 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 SLC34A1Q06495 639 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 MTMR1Q13613 665 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CHI3L2Q15782 390 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 RCOR2Q8IZ40 523 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CNKSR1Q969H4 720 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 INO80BQ9C086 356 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 TRIM49D1C9J1S8 452 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 NOL4O94818 638 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 APOEP02649 317 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CALB1P05937 261 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CYP11B1P15538 503 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CBWD6Q4V339 395 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 FSCBQ5H9T9 825 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CBWD3Q5JTY5 395 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CBWD5Q5RIA9 395 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 LRRC74BQ6ZQY2 392 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 SCUBE1Q8IWY4 988 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 CYP2W1Q8TAV3 490 aa13.26□□□□□ -0.29
COMMD4-209ENST00000564068 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-209ENST00000564068 RASA2Q15283 850 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 RARS2Q5T160 578 aaKnown RBP13.25□□□□□ -0.29
COMMD4-209ENST00000564068 ARHGAP22Q7Z5H3 698 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 ZBTB8OSQ8IWT0 167 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
COMMD4-209ENST00000564068 E2F7Q96AV8 911 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 HES6Q96HZ4 224 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TMEM120AQ9BXJ8 343 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 FOXP3Q9BZS1 431 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 AIM2O14862 343 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TBX3O15119 743 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 EIF3DO15371 548 aaKnown RBP eCLIP13.25□□□□□ -0.29
COMMD4-209ENST00000564068 P4HA1P13674 534 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 CREB1P16220 341 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TYK2P29597 1187 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 PRKCIP41743 596 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 SNX16P57768 344 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 CENPCQ03188 943 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TFDP2Q14188 446 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 KAT5Q92993 513 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TMEM121Q9BTD3 319 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 KIFC3Q9BVG8 833 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 ZC3H7BQ9UGR2 993 aaKnown RBP13.25□□□□□ -0.29
COMMD4-209ENST00000564068 PCDHB2Q9Y5E7 798 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 TCN1P20061 433 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-209ENST00000564068 BGNP21810 368 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms