RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 ANO9A1A5B4 782 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 ANKRD63C9JTQ0 380 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 PIRO00625 290 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 CEBPBP17676 345 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 RFX1P22670 979 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 LILRA4P59901 499 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 GPR17Q13304 367 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 MYBPC2Q14324 1141 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 ZC2HC1CQ53FD0 456 aaPredicted RBP18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 SLC44A4Q53GD3 710 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 JADE1Q6IE81 842 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 RNF19BQ6ZMZ0 732 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 ASCL5Q7RTU5 278 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 TMEM130Q8N3G9 435 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 KXD1Q9BQD3 176 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 CORO1BQ9BR76 489 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 ZHX3Q9H4I2 956 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 CEP72Q9P209 647 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 C2CD2Q9Y426 696 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 MYO15AQ9UKN7 3530 aa18.69■□□□□ 0.58
VPS9D1-203ENST00000563798 KANSL1LA0AUZ9 987 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 MOSPD3O75425 235 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 VNN2O95498 520 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 CPB1P15086 417 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 FCARP24071 287 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 CCR2P41597 374 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 GUCY2FP51841 1108 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 TWF1Q12792 350 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 MLF2Q15773 248 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 SPECC1Q5M775 1068 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 CYP4A22Q5TCH4 519 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 IQCEQ6IPM2 695 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 ELMOD1Q8N336 334 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 NKD2Q969F2 451 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 ZNF512Q96ME7 567 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 HSFX1Q9UBD0 423 aa18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 TIMM13Q9Y5L4 95 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-203ENST00000563798 PPEF2O14830 753 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 CYP11A1P05108 521 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 GAP43P17677 238 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 TMEM132DQ14C87 1099 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 RRAGBQ5VZM2 374 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 C9orf57Q5W0N0 161 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 ADALQ6DHV7 355 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 TANGO2Q6ICL3 276 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 DSTYKQ6XUX3 929 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 PDZD4Q76G19 769 aaPredicted RBP18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 USP37Q86T82 979 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 SFR1Q86XK3 245 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 TCEAL4Q96EI5 215 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 SENP8Q96LD8 212 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 BACH2Q9BYV9 841 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 PLA2G2FQ9BZM2 168 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 FOXQ1Q9C009 403 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 SEMA4AQ9H3S1 761 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 TRPV4Q9HBA0 871 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 OLFML3Q9NRN5 406 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 AGO2Q9UKV8 859 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 MTMR6Q9Y217 621 aa18.67■□□□□ 0.58
VPS9D1-203ENST00000563798 MYMKA6NI61 221 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 TISP43B9A030 160 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 SPTLC1O15269 473 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 DCNP07585 359 aaKnown RBP18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 NFICP08651 508 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 ODC1P11926 461 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 GLULP15104 373 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 ADSSP30520 456 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 TXLNAP40222 546 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 ACOT2P49753 483 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 PLD1Q13393 1074 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 POSTNQ15063 836 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 FAM78AQ5JUQ0 283 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 OVOS1Q6IE37 1185 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 FAM173BQ6P4H8 233 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 CRELD2Q6UXH1 353 aaPredicted RBP18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 SV2BQ7L1I2 683 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 DYMQ7RTS9 669 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 C1orf210Q8IVY1 113 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 DNASE1L2Q92874 299 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 ASB16Q96NS5 453 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 NELL2Q99435 816 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 LRRC3Q9BY71 257 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 GPR88Q9GZN0 384 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 ZSCAN16Q9H4T2 348 aaPredicted RBP18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 TRPV5Q9NQA5 729 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 YIPF1Q9Y548 306 aa18.66■□□□□ 0.58
VPS9D1-203ENST00000563798 FRMD3A2A2Y4 597 aa18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 NRG2O14511 850 aaPredicted RBP18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 MAGEA9P43362 315 aa18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 HS6ST3Q8IZP7 471 aa18.65■□□□□ 0.58
VPS9D1-203ENST00000563798 SMARCD2Q92925 531 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms