RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ATP11BQ9Y2G3 1177 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 UMODL1Q5DID0 1318 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 MROH7Q68CQ1 1323 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ADGRA3Q8IWK6 1321 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 LAMA2P24043 3122 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 FAM221BA6H8Z2 402 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TRIM43BA6NCK2 446 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 F8W735 103 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TLR3O15455 904 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 GPR32O75388 356 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PDGFRBP09619 1106 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 CKBP12277 381 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 GPC3P51654 580 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 ASIC1P78348 528 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 MRPS6P82932 125 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 LAMTOR4Q0VGL1 99 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 COASYQ13057 564 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PNOCQ13519 176 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 MBTPS1Q14703 1052 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 GPNMBQ14956 572 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 DUOXA2Q1HG44 320 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 KLHL40Q2TBA0 621 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 RBM43Q6ZSC3 357 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 UNC13DQ70J99 1090 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 SFR1Q86XK3 245 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 KSR1Q8IVT5 923 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 METTL13Q8N6R0 699 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TCP11Q8WWU5 503 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PRPF31Q8WWY3 499 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PSPC1Q8WXF1 523 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 KIFAP3Q92845 792 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 HPS3Q969F9 1004 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TRIM43Q96BQ3 446 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 VWCEQ96DN2 955 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 ZNF668Q96K58 619 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 NECAB3Q96P71 396 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 MAP7D2Q96T17 732 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PPP1R16BQ96T49 567 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TRIM56Q9BRZ2 755 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 NT5C1AQ9BXI3 368 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 FAM49AQ9H0Q0 323 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 WNT8AQ9H1J5 351 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 SUGCTQ9HAC7 445 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TMEM39AQ9NV64 488 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 ODF2LQ9ULJ1 636 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 AKT3Q9Y243 479 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 PCDHA5Q9Y5H7 936 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 TRPV2Q9Y5S1 764 aa5.72□□□□□ -1.49
HERPUD1-207ENST00000563781 RANBP2P49792 3224 aaKnown RBP5.71□□□□□ -1.49
HERPUD1-207ENST00000563781 A0A087WZ62 844 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PVALEFA0A1B0GWK0 134 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 DCDC2CA8MYV0 355 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CAND2O75155 1236 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 TBCAO75347 108 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 RHOBTB3O94955 611 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CHRNA1P02708 482 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 RPN1P04843 607 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 EDN1P05305 212 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KRT18P05783 430 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 MYL1P05976 194 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CLTBP09497 229 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PLS3P13797 630 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 IDEP14735 1019 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 DARSP14868 501 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 GAP43P17677 238 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PTMSP20962 102 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 BMP6P22004 513 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ITGB8P26012 769 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 TMOD1P28289 359 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NAMPTP43490 491 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NPTX2P47972 431 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 SARSP49591 514 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 RGS19P49795 217 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 DNM2P50570 870 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CASP5P51878 434 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CRYBB1P53674 252 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NCKAP1LP55160 1127 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PEX3P56589 373 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NLRP11P59045 1033 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PTENP60484 403 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM62Q0P6H9 643 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 MXD4Q14582 209 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KCNB1Q14721 858 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CAMK4Q16566 473 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KIZQ2M2Z5 673 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CCDC183Q5T5S1 534 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NT5DC1Q5TFE4 455 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CDCA2Q69YH5 1023 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ACAD11Q709F0 780 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 LRRC8DQ7L1W4 858 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF410Q86VK4 478 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 RHPN2Q8IUC4 686 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CCDC65Q8IXS2 484 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NME8Q8N427 588 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 RNF149Q8NC42 400 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KIAA0895Q8NCT3 520 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms