RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KRT31Q15323 416 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 VWA3BQ502W6 1294 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 FAM171A1Q5VUB5 890 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 TAS1R2Q8TE23 839 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 POF1BQ8WVV4 589 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 TAF4BQ92750 862 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 SUSD3Q96L08 255 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 LMAN2LQ9H0V9 348 aa20.24■□□□□ 0.83
RAB40C-207ENST00000563109 TTYH1Q9H313 450 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-207ENST00000563109 PMM2O15305 246 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
RAB40C-207ENST00000563109 CST3P01034 146 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-207ENST00000563109 URODP06132 367 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 P4HA1P13674 534 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 AARSP49588 968 aaKnown RBP eCLIP20.23■□□□□ 0.833e-8■■■■■ 29.1
RAB40C-207ENST00000563109 TNNC1P63316 161 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 PTPROQ16827 1216 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 SGSM1Q2NKQ1 1148 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 USP41Q3LFD5 358 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 TIGD5Q53EQ6 642 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 KIAA1841Q6NSI8 718 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 CD300LGQ6UXG3 332 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-207ENST00000563109 VPS52Q8N1B4 723 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 SPPL3Q8TCT6 385 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 HSD3B7Q9H2F3 369 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 NDST4Q9H3R1 872 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 ENTPD7Q9NQZ7 604 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 RAB20Q9NX57 234 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 LIMA1Q9UHB6 759 aaKnown RBP20.23■□□□□ 0.83
RAB40C-207ENST00000563109 PCDHB8Q9UN66 801 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 TSC2P49815 1807 aa20.23■□□□□ 0.83
RAB40C-207ENST00000563109 EPOPA6NHQ4 379 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 I3L4J1 428 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 SYN3O14994 580 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 SPTLC1O15269 473 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 GRM6O15303 877 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 CA8P35219 290 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 GLUD2P49448 558 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 ZNF667Q5HYK9 610 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 WDR44Q5JSH3 913 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 CEP57Q86XR8 500 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 SENP8Q96LD8 212 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 VN1R3Q9BXE9 311 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 DSEQ9UL01 958 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 SSX2IPQ9Y2D8 614 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
RAB40C-207ENST00000563109 M0QZQ0 153 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 CYB561D2O14569 222 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 LPXNO60711 386 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 HUS1O60921 280 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 CSPG5O95196 566 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 IGFBP6P24592 240 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 COPB1P53618 953 aaKnown RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 NOP14P78316 857 aaKnown RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 WDR72Q3MJ13 1102 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 MIIPQ5JXC2 388 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 FKBP15Q5T1M5 1219 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 PDE12Q6L8Q7 609 aaKnown RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 PDXDC1Q6P996 788 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 GBP6Q6ZN66 633 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 METTL23Q86XA0 190 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 RNF168Q8IYW5 571 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 TCF25Q9BQ70 676 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 TTPALQ9BTX7 342 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 ZBP1Q9H171 429 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 XYLT2Q9H1B5 865 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 VPS16Q9H269 839 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 PRDM12Q9H4Q4 367 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 VRTNQ9H8Y1 702 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 GDAP2Q9NXN4 497 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 NXF1Q9UBU9 619 aaKnown RBP20.21■□□□□ 0.83
RAB40C-207ENST00000563109 COQ4Q9Y3A0 265 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 VWA8A3KMH1 1905 aa20.21■□□□□ 0.83
RAB40C-207ENST00000563109 GTPBP10A4D1E9 387 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 EFEMP2O95967 443 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 ASS1P00966 412 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 SERPINC1P01008 464 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 CTSAP10619 480 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 TYMPP19971 482 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 FGFR3P22607 806 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 TKTP29401 623 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 SMC1AQ14683 1233 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 FILIP1LQ4L180 1135 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 SCARA3Q6AZY7 606 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 MICAL1Q8TDZ2 1067 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 FAM161BQ96MY7 647 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 MMS19Q96T76 1030 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 PI4K2AQ9BTU6 479 aa20.2■□□□□ 0.82
RAB40C-207ENST00000563109 NGRNQ9NPE2 291 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
RAB40C-207ENST00000563109 RFXAPO00287 272 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 DNAJB1P25685 340 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms