RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 RPS6KA1Q15418 735 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 NAB2Q15742 525 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 FXNQ16595 210 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 UBE2SQ16763 222 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 SLC35G1Q2M3R5 365 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 CRY2Q49AN0 593 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 NFRKBQ6P4R8 1299 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 VHLLQ6RSH7 139 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 B4GALNT4Q76KP1 1039 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 SP8Q8IXZ3 490 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 MFSD4AQ8N468 514 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 EIF1ADQ8N9N8 165 aaKnown RBP8.65□□□□□ -1.02
KARS-203ENST00000562875 CCDC26Q8TAB7 109 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 TBC1D16Q8TBP0 767 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 LRRC1Q9BTT6 524 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 ANO3Q9BYT9 981 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 NLRC4Q9NPP4 1024 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 PLCB1Q9NQ66 1216 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 USP40Q9NVE5 1235 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 ARMCX3Q9UH62 379 aaPredicted RBP8.65□□□□□ -1.02
KARS-203ENST00000562875 RSPH14Q9UHP6 348 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 HDAC9Q9UKV0 1011 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 INTUQ9ULD6 942 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 SIPA1L1O43166 1804 aa8.65□□□□□ -1.02
KARS-203ENST00000562875 NRXN2Q9P2S2 1712 aa8.65□□□□□ -1.03
KARS-203ENST00000562875 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 BUB1O43683 1085 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 SHOX2O60902 331 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 PALMO75781 387 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 GFPT2O94808 682 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 PRPF6O94906 941 aaKnown RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 TP53P04637 393 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 CEACAM5P06731 702 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 FERP16591 822 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 NR2F2P24468 414 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 SLC1A4P43007 532 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 NOP2P46087 812 aaKnown RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 SLC7A5Q01650 507 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 GABPAQ06546 454 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 IKQ13123 557 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 CUL1Q13616 776 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 LRRC41Q15345 812 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 CDC37Q16543 378 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 KIAA0753Q2KHM9 967 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 TTC31Q49AM3 519 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 KLHDC7AQ5VTJ3 777 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 HHIPL2Q6UWX4 724 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 KRT26Q7Z3Y9 468 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 TRIM59Q8IWR1 403 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 NELFCDQ8IXH7 590 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 C10orf67Q8IYJ2 551 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 CELF2-AS1Q8N7Q2 184 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 SMCR8Q8TEV9 937 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 TBC1D5Q92609 795 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 HPS3Q969F9 1004 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 DNAJC19Q96DA6 116 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 Q96M66 194 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 FAM20AQ96MK3 541 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 NAP1L3Q99457 506 aaPredicted RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 TYW1Q9NV66 732 aaKnown RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 AIPL1Q9NZN9 384 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 TFR2Q9UP52 801 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 DIS3Q9Y2L1 958 aaKnown RBP8.64□□□□□ -1.03
KARS-203ENST00000562875 PCDHA1Q9Y5I3 950 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 PSME4Q14997 1843 aa8.64□□□□□ -1.03
KARS-203ENST00000562875 RGPD3A6NKT7 1758 aaPredicted RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 RGPD4Q7Z3J3 1758 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 CYP3A7-CYP3A51PA0A087WV96 503 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 B2RBV5 119 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 HMGB1P1B2RPK0 211 aaPredicted RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 E9PMD0 336 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 PDXKO00764 312 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 ZNF263O14978 683 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 CYP3A7P24462 503 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 GNGT1P63211 74 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 EXOC3L4Q17RC7 722 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 KNOP1Q1ED39 458 aaKnown RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 ASTE1Q2TB18 679 aaPredicted RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 CERKLQ49MI3 558 aaPredicted RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 Q4G0T1 1027 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 ZCWPW2Q504Y3 356 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 TCERG1LQ5VWI1 586 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 SLFN13Q68D06 897 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 KIAA1211LQ6NV74 962 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 C6orf15Q6UXA7 325 aaPredicted RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 LRRC31Q6UY01 552 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 ZC3H3Q8IXZ2 948 aaKnown RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 GSPT2Q8IYD1 628 aaKnown RBP8.63□□□□□ -1.03
KARS-203ENST00000562875 MREGQ8N565 214 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 FAM133AQ8N9E0 248 aa8.63□□□□□ -1.03
KARS-203ENST00000562875 DTWD2Q8NBA8 298 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms