RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 SPATA1Q5VX52 437 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 CYP26C1Q6V0L0 522 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 RNF135Q8IUD6 432 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 TMEM130Q8N3G9 435 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 GLIS3Q8NEA6 775 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 FEZF2Q8TBJ5 459 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 BLZF1Q9H2G9 400 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
FANCA-209ENST00000562424 USP25Q9UHP3 1055 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 SERTAD1Q9UHV2 236 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 FBXW11Q9UKB1 542 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 DERAQ9Y315 318 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 NR2E1Q9Y466 385 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 BACE2Q9Y5Z0 518 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 CCDC195A0A1B0GUA6 201 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 A0A1B0GVL5 298 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 PVALEFA0A1B0GWK0 134 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 RFPL2O75678 378 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
FANCA-209ENST00000562424 NFICP08651 508 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 MCM4P33991 863 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 OR1D2P34982 312 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 AFMP43652 599 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 CUL4BQ13620 913 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 MRPL58Q14197 206 aaKnown RBP12.47□□□□□ -0.41
FANCA-209ENST00000562424 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
FANCA-209ENST00000562424 RSPO2Q6UXX9 243 aaPredicted RBP12.47□□□□□ -0.41
FANCA-209ENST00000562424 HFE2Q6ZVN8 426 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 EPM2AIP1Q7L775 607 aaPredicted RBP12.47□□□□□ -0.41
FANCA-209ENST00000562424 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 ZDHHC7Q9NXF8 308 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 C2CD2Q9Y426 696 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 TECTAO75443 2155 aa12.47□□□□□ -0.41
FANCA-209ENST00000562424 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 TSC2P49815 1807 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 UBE4BO95155 1302 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 H7C4K7 107 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 M0QZQ0 153 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
FANCA-209ENST00000562424 TBC1D4O60343 1298 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 IL18RAPO95256 599 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 SP100P23497 879 aaPredicted RBP12.46□□□□□ -0.41
FANCA-209ENST00000562424 HOXD13P35453 343 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 AARSP49588 968 aaKnown RBP eCLIP12.46□□□□□ -0.41
FANCA-209ENST00000562424 NUCB2P80303 420 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 SLC8B1Q6J4K2 584 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 ARMCX5Q6P1M9 558 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 BRSK2Q8IWQ3 736 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 GRAMD1CQ8IYS0 662 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 ZSWIM2Q8NEG5 633 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 APPL2Q8NEU8 664 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 SMG7Q92540 1137 aaKnown RBP12.46□□□□□ -0.41
FANCA-209ENST00000562424 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.41
FANCA-209ENST00000562424 SAAL1Q96ER3 474 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 PAGE5Q96GU1 130 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 USTQ9Y2C2 406 aa12.46□□□□□ -0.41
FANCA-209ENST00000562424 ZNF318Q5VUA4 2279 aa12.46□□□□□ -0.42
FANCA-209ENST00000562424 NOTCH4Q99466 2003 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 A0A1W2PQ27 194 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 A0A1W2PQ64 194 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 A0A1W2PQD8 194 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 C2CD4DB7Z1M9 353 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 PIRO00625 290 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 PPEF2O14830 753 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 KLRC4O43908 158 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 EXTL3O43909 919 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 HNRNPA1P09651 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
FANCA-209ENST00000562424 PAX3P23760 479 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 HOXA9P31269 272 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 SYKP43405 635 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 NDUFA8P51970 172 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 C9orf57Q5W0N0 161 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 RTL10Q7L3V2 364 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 EFCAB13Q8IY85 973 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 PCIF1Q9H4Z3 704 aa12.45□□□□□ -0.42
FANCA-209ENST00000562424 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms