RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 HTRA3P83110 453 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 CENPCQ03188 943 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 PTGISQ16647 500 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 WDR72Q3MJ13 1102 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 FAM47CQ5HY64 1035 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 RSRC2Q7L4I2 434 aaKnown RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 ZNF572Q7Z3I7 529 aaPredicted RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 MRPL10Q7Z7H8 261 aaKnown RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 SYCE1Q8N0S2 351 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 TTC39CQ8N584 583 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 LRRC52Q8N7C0 313 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 BEST2Q8NFU1 509 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 ZNF606Q8WXB4 792 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 HPDLQ96IR7 371 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 VCPIP1Q96JH7 1222 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 TRAIPQ9BWF2 469 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 SEZ6LQ9BYH1 1024 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 CXCL16Q9H2A7 254 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 NXF3Q9H4D5 531 aaKnown RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 ERVK-5Q9HDB9 667 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 RNF14Q9UBS8 474 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 GTF3C4Q9UKN8 822 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 UBQLN1Q9UMX0 589 aaKnown RBP10.18□□□□□ -0.78
CDH13-205ENST00000562307 POLIQ9UNA4 740 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 ST3GAL5Q9UNP4 418 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 AGAP1Q9UPQ3 857 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 HYOU1Q9Y4L1 999 aa10.18□□□□□ -0.78
CDH13-205ENST00000562307 SMIM28A0A1B0GU29 152 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 GPR182O15218 404 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 ZNF623O75123 536 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 CALCAP01258 141 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 CD4P01730 458 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 KRT19P08727 400 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 WEE2P0C1S8 567 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 MYBL1P10243 752 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 ABCB4P21439 1286 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 POLR2BP30876 1174 aaKnown RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 INCA1Q0VD86 236 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 DSC3Q14574 896 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 FBXO47Q5MNV8 452 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 PHF13Q86YI8 300 aaPredicted RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 CREG2Q8IUH2 290 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 MCOLN2Q8IZK6 566 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 USP38Q8NB14 1042 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 ARRDC4Q8NCT1 418 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 ANKRD7Q92527 254 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 CYFIP2Q96F07 1278 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 TRIM11Q96F44 468 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 RPGRIP1Q96KN7 1286 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 GLT1D1Q96MS3 346 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 OSBPL9Q96SU4 736 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 ZNF518BQ9C0D4 1074 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 SDCBP2Q9H190 292 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 AVENQ9NQS1 362 aaPredicted RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 UVRAGQ9P2Y5 699 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 NXF1Q9UBU9 619 aaKnown RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 COG5Q9UP83 839 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 HES2Q9Y543 173 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 IPPQ9Y573 584 aa10.17□□□□□ -0.78
CDH13-205ENST00000562307 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
CDH13-205ENST00000562307 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 PIRO00625 290 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 THAP12O43422 761 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 XPOTO43592 962 aaKnown RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 NCK2O43639 380 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 SRGAP2O75044 1071 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CILPO75339 1184 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 KIF4AO95239 1232 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 LSM8O95777 96 aaKnown RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 FTCDO95954 541 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CFHP08603 1231 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CTAGE8P0CG41 777 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CD58P19256 250 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 AKAP5P24588 427 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 THPOP40225 353 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 RAD23BP54727 409 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 NOMO3P69849 1222 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 ITIH3Q06033 890 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CKAP4Q07065 602 aaKnown RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 MYO1EQ12965 1108 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 PTP4A2Q12974 167 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 NAA30Q147X3 362 aaPredicted RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 RPS6KA1Q15418 735 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 TWF2Q6IBS0 349 aaKnown RBP10.16□□□□□ -0.78
CDH13-205ENST00000562307 C11orf63Q6NUN7 778 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 LIMS2Q7Z4I7 341 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 NT5DC3Q86UY8 548 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 CTAGE4Q8IX94 777 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 TMEM130Q8N3G9 435 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 TSC1Q92574 1164 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 UBXN4Q92575 508 aa10.16□□□□□ -0.78
CDH13-205ENST00000562307 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms