RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MAGEA9P43362 315 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LIG4P49917 911 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 GUCY2FP51841 1108 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CYP4A22Q5TCH4 519 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 VITQ6UXI7 678 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF852Q6ZMS4 543 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 GPBP1Q86WP2 473 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 KIAA2013Q8IYS2 634 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF687Q8N1G0 1237 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ELMOD1Q8N336 334 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 SUMF1Q8NBK3 374 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 AK8Q96MA6 479 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF512Q96ME7 567 aaPredicted RBP18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PGLYRP2Q96PD5 576 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CRISPLD1Q9H336 500 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 BLOC1S4Q9NUP1 217 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TBX20Q9UMR3 447 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 YIPF1Q9Y548 306 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TSC2P49815 1807 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 K7ENM7 598 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PPEF2O14830 753 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PIGRP01833 764 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ADRB2P07550 413 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MYL4P12829 197 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 RPS9P46781 194 aaKnown RBP18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF131P52739 623 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CSTF1Q05048 431 aaKnown RBP18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 GRIN1Q05586 938 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ERMP1Q7Z2K6 904 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 DCLK2Q8N568 766 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 SMARCD2Q92925 531 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 NELL2Q99435 816 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TRMT61BQ9BVS5 477 aaKnown RBP18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ASAH2Q9NR71 780 aa18.16■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TICRRQ7Z2Z1 1910 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 A0A0B4J269 797 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 OGTO15294 1046 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 SLC26A4O43511 780 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 KINO60870 393 aaKnown RBP18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 VIPR2P41587 438 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TEAD2Q15562 447 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 SLC39A4Q6P5W5 647 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MYCT1Q8N699 235 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LEMD2Q8NC56 503 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 SHKBP1Q8TBC3 707 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZSCAN18Q8TBC5 510 aaPredicted RBP18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 RUBCNQ92622 972 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 RMDN1Q96DB5 314 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FIZ1Q96SL8 496 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 HINFPQ9BQA5 517 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LRRC3Q9BY71 257 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 DNAJC25Q9H1X3 360 aa18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF334Q9HCZ1 680 aaPredicted RBP18.15■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 NCAM2O15394 837 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TRAK2O60296 914 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PSMC3P17980 439 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PLCG1P19174 1290 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GDI1P31150 447 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 UBA7P41226 1012 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 DUSP4Q13115 394 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GPR17Q13304 367 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MCM6Q14566 821 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 KARSQ15046 597 aaKnown RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 KYAT1Q16773 422 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SPATA1Q5VX52 437 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TSSK4Q6SA08 328 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 DSTYKQ6XUX3 929 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TMC8Q8IU68 726 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZBTB44Q8NCP5 570 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 RAD54LQ92698 747 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 NELL1Q92832 810 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 IRF7Q92985 503 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 RSPRY1Q96DX4 576 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CALML4Q96GE6 196 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 OXCT2Q9BYC2 517 aaPredicted RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 RPF1Q9H9Y2 349 aaKnown RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TRPV4Q9HBA0 871 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PARVGQ9HBI0 331 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PRMT8Q9NR22 394 aaPredicted RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CPSF3Q9UKF6 684 aaKnown RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MRPS17Q9Y2R5 130 aaKnown RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PCDHGA2Q9Y5H1 932 aa18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.14■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 A0A1W2PRU2 124 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 OR6C75A6NL08 312 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ARNTLO00327 626 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SPTLC1O15269 473 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 XPOTO43592 962 aaKnown RBP18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 FAM13AO94988 1023 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 NFICP08651 508 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SCP2P22307 547 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LILRA4P59901 499 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MTAPQ13126 283 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms