RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SLC44A3Q8N4M1 653 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 CPA6Q8N4T0 437 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 SIMC1Q8NDZ2 872 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 TMIEQ8NEW7 156 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 ZCRB1Q8TBF4 217 aaKnown RBP3.1□□□□□ -1.91
CHD9-204ENST00000561869 CAVIN3Q969G5 261 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 VKORC1Q9BQB6 163 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 TBCCD1Q9NVR7 557 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 KCTD5Q9NXV2 234 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 PRAMEF33A0A0G2JMD5 474 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 MGST3O14880 152 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 PRAMEF10O60809 474 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 SUN1O94901 812 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 POU2F2P09086 479 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 KCNA2P16389 499 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 LPOP22079 712 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 GATA3P23771 443 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 CCND1P24385 295 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 POU6F2P78424 691 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 SIM1P81133 766 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 MC2RQ01718 297 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 SF3B3Q15393 1217 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 ZNF362Q5T0B9 420 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 KIAA0895LQ68EN5 471 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 SLC4A10Q6U841 1118 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 USP45Q70EL2 814 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 FAM90A1Q86YD7 464 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 PDPRQ8NCN5 879 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 NSUN7Q8NE18 718 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 SSH3Q8TE77 659 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 STAG1Q8WVM7 1258 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 SLC9A6Q92581 669 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 PTCD3Q96EY7 689 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 PDLIM2Q96JY6 352 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 BBC3Q96PG8 261 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 AIFM2Q9BRQ8 373 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 PACSIN1Q9BY11 444 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 RIOX1Q9H6W3 641 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 TCF7L1Q9HCS4 588 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 CASS4Q9NQ75 786 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 SIDT1Q9NXL6 827 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 TESQ9UGI8 421 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 ZNHIT2Q9UHR6 403 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 CDYLQ9Y232 598 aa3.09□□□□□ -1.91
CHD9-204ENST00000561869 NOP58Q9Y2X3 529 aaKnown RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.09□□□□□ -1.91
CHD9-204ENST00000561869 PROM1O43490 865 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 SNUPNO95149 360 aaKnown RBP3.08□□□□□ -1.92
CHD9-204ENST00000561869 ANXA1P04083 346 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 RPLP2P05387 115 aaKnown RBP3.08□□□□□ -1.92
CHD9-204ENST00000561869 SRGNP10124 158 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 FBLP22087 321 aaKnown RBP3.08□□□□□ -1.92
CHD9-204ENST00000561869 PRDX5P30044 214 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 CXCR5P32302 372 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 CYP2C19P33261 490 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 IL12RB1P42701 662 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 PTH2RP49190 550 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 RARRES1P49788 294 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 HK3P52790 923 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 EXOSC10Q01780 885 aaKnown RBP3.08□□□□□ -1.92
CHD9-204ENST00000561869 NOGQ13253 232 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 DYRK1AQ13627 763 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 CCDC93Q567U6 631 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 DPY19L2P1Q6NXN4 242 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 VWA1Q6PCB0 445 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 CLNKQ7Z7G1 428 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 ADGRG3Q86Y34 549 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 COLGALT2Q8IYK4 626 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 MIER2Q8N344 545 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 SLC17A8Q8NDX2 589 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 POC1BQ8TC44 478 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 SCAMP4Q969E2 229 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 VOPP1Q96AW1 172 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 CHMP4CQ96CF2 233 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 IMPG2Q9BZV3 1241 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 R3HDMLQ9H3Y0 253 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 MRPS18AQ9NVS2 196 aaKnown RBP3.08□□□□□ -1.92
CHD9-204ENST00000561869 ETAA1Q9NY74 926 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 PCDHA3Q9Y5H8 950 aa3.08□□□□□ -1.92
CHD9-204ENST00000561869 PCSK5Q92824 1860 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 TRGV11A0A075B6L2 103 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 CCDC195A0A1B0GUA6 201 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 ANKRD62A6NC57 917 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 PPFIA2O75334 1257 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 C1QL1O75973 258 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 MATN4O95460 622 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 TOB1P50616 345 aaPredicted RBP3.07□□□□□ -1.92
CHD9-204ENST00000561869 ANXA11P50995 505 aaKnown RBP3.07□□□□□ -1.92
CHD9-204ENST00000561869 NEK2P51955 445 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 HNRNPMP52272 730 aaKnown RBP eCLIP3.07□□□□□ -1.921e-8■■■□□ 15.2
CHD9-204ENST00000561869 MAP2K6P52564 334 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 RPS7P62081 194 aaKnown RBP3.07□□□□□ -1.92
CHD9-204ENST00000561869 ZNF844Q08AG5 666 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 TCF15Q12870 199 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 KIF22Q14807 665 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 CD300EQ496F6 205 aaPredicted RBP3.07□□□□□ -1.92
CHD9-204ENST00000561869 CATIPQ7Z7H3 387 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 PDSS2Q86YH6 399 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 ADGRG5Q8IZF4 528 aa3.07□□□□□ -1.92
CHD9-204ENST00000561869 C3orf20Q8ND61 904 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms