RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 UQCRBP14927 111 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 WDR4P57081 412 aaKnown RBP19.67■□□□□ 0.74
RAB40C-206ENST00000561781 CXCL9Q07325 125 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 KCNH2Q12809 1159 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 INAQ16352 499 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 CCDC153Q494R4 210 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 C6orf163Q5TEZ5 329 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 FYB2Q5VWT5 728 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 RASSF3Q86WH2 238 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 OGFOD1Q8N543 542 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 OR6Y1Q8NGX8 325 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 VPS50Q96JG6 964 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 CEP63Q96MT8 703 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 SSX2IPQ9Y2D8 614 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 MYPNQ86TC9 1320 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 MAGEB6P1A0A0J9YX57 407 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 SH3PXD2BA1X283 911 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 CCDC160A6NGH7 325 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 ANKRD63C9JTQ0 380 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 IPO5O00410 1097 aaKnown RBP19.67■□□□□ 0.74
RAB40C-206ENST00000561781 HAUS5O94927 633 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 PDGFRBP09619 1106 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 CHN2P52757 468 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 GALCP54803 685 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 EVX2Q03828 476 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 SPARCL1Q14515 664 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 PDSS2Q86YH6 399 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 SCAIQ8N9R8 606 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 SLC35G2Q8TBE7 412 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 U2AF1L4Q8WU68 220 aaKnown RBP19.67■□□□□ 0.74
RAB40C-206ENST00000561781 PNMA5Q96PV4 448 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 COA1Q9GZY4 146 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 FAM32AQ9Y421 112 aaKnown RBP19.67■□□□□ 0.74
RAB40C-206ENST00000561781 HEY1Q9Y5J3 304 aa19.67■□□□□ 0.74
RAB40C-206ENST00000561781 ADCY3O60266 1144 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 PRKCIP41743 596 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 MARSP56192 900 aaKnown RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 COG7P83436 770 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 RELAQ04206 551 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 TBL3Q12788 808 aaKnown RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 PDK4Q16654 411 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 EXOC3L4Q17RC7 722 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 MAP3K21Q5TCX8 1036 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 DPY19L2P1Q6NXN4 242 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 TTC27Q6P3X3 843 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 SLC2A7Q6PXP3 512 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 HEATR3Q7Z4Q2 680 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 CERS5Q8N5B7 392 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 SAMD3Q8N6K7 520 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 DAGLBQ8NCG7 672 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 ITPKCQ96DU7 683 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 ZMAT2Q96NC0 199 aaKnown RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 SLCO1B3Q9NPD5 702 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 STK17AQ9UEE5 414 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 ZNRF3Q9ULT6 936 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 FAF1Q9UNN5 650 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 CDH16O75309 829 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 DDNO94850 711 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 FGRP09769 529 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 GSTT2P0CG29 244 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 GSTT2BP0CG30 244 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 XIAPP98170 497 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 PLCB3Q01970 1234 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 LPIN1Q14693 890 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 TNIP1Q15025 636 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 TMEM266Q2M3C6 531 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 ZNF362Q5T0B9 420 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
RAB40C-206ENST00000561781 PLEKHO2Q8TD55 490 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 ALG3Q92685 438 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 CASP10Q92851 521 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 UBN1Q9NPG3 1134 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 CYLDQ9NQC7 956 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 THEGQ9P2T0 379 aa19.66■□□□□ 0.74
RAB40C-206ENST00000561781 IL1R1P14778 569 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 AMPD1P23109 780 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 PPIDQ08752 370 aaKnown RBP19.65■□□□□ 0.74
RAB40C-206ENST00000561781 CALCOCO2Q13137 446 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 NET1Q7Z628 596 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-206ENST00000561781 VPS36Q86VN1 386 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 SFR1Q86XK3 245 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 IQCF2Q8IXL9 164 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 CGREF1Q99674 301 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 FGFBP2Q9BYJ0 223 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 A0A1W2PRG0 241 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 SPDYE16A6NNV3 312 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-206ENST00000561781 MAGEC1O60732 1142 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 S100A1P23297 94 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 PGM1P36871 562 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 TRMT5Q32P41 509 aaKnown RBP19.65■□□□□ 0.74
RAB40C-206ENST00000561781 ADGRG6Q86SQ4 1221 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 PRELID2Q8N945 189 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 CDK5RAP3Q96JB5 506 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 ARL8BQ9NVJ2 186 aa19.65■□□□□ 0.74
RAB40C-206ENST00000561781 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 FBP2O00757 339 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 PGM3O95394 542 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 PRDX5P30044 214 aa19.64■□□□□ 0.74
RAB40C-206ENST00000561781 PPATQ06203 517 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms