RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CCDC169A6NNP5 214 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 PP2D1A8MPX8 630 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 MAN2B1O00754 1011 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 NCAM2O15394 837 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 FAM189A1O60320 539 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 OAZ2O95190 189 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 LETM1O95202 739 aaPredicted RBP9.17□□□□□ -0.94
PALB2-202ENST00000561514 PAPSS2O95340 614 aaPredicted RBP9.17□□□□□ -0.94
PALB2-202ENST00000561514 SEC24BO95487 1268 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 VNN2O95498 520 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 LRG1P02750 347 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 MAPTP10636 758 aaKnown RBP9.17□□□□□ -0.94
PALB2-202ENST00000561514 PLS3P13797 630 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 SCP2P22307 547 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 TGM1P22735 817 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 SLC20A2Q08357 652 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 KRT79Q5XKE5 535 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 TMC8Q8IU68 726 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 KIAA2013Q8IYS2 634 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
PALB2-202ENST00000561514 APPL2Q8NEU8 664 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 DEPDC1BQ8WUY9 529 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 DDX12PQ92771 950 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 MCRS1Q96EZ8 462 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 MSANTD3Q96H12 275 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 LRRC3Q9BY71 257 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 CYP4F11Q9HBI6 524 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 ZFP14Q9HCL3 533 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 KMT5AQ9NQR1 393 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 CEP72Q9P209 647 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 CACNA1BQ00975 2339 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 DOCK6Q96HP0 2047 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 COL4A2P08572 1712 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 PRRG1O14668 218 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 SLC16A4O15374 487 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 SLC26A4O43511 780 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 PIGRP01833 764 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 PSMC3P17980 439 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 TYMPP19971 482 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 CD72P21854 359 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 WEE1P30291 646 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 ELF1P32519 619 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 OSTNP61366 133 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 CSTF1Q05048 431 aaKnown RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 DMTNQ08495 405 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 FCHO2Q0JRZ9 810 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 MTAPQ13126 283 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 CTXN3Q4LDR2 81 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 TMEM119Q4V9L6 283 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 VITQ6UXI7 678 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 DGLUCYQ7Z3D6 616 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 DCLK2Q8N568 766 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 SYT2Q8N9I0 419 aaPredicted RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 SHKBP1Q8TBC3 707 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 IRF7Q92985 503 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 ZSWIM3Q96MP5 696 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 CORO1BQ9BR76 489 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 TRMT61BQ9BVS5 477 aaKnown RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 HAPLN2Q9GZV7 340 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 DNAJC25Q9H1X3 360 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 ZNF334Q9HCZ1 680 aaPredicted RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 HSFX1Q9UBD0 423 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 TUBGCP4Q9UGJ1 667 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
PALB2-202ENST00000561514 YIPF1Q9Y548 306 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 NUB1Q9Y5A7 615 aa9.16□□□□□ -0.94
PALB2-202ENST00000561514 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 H0YCG3 227 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 CLTAP09496 248 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 PAX3P23760 479 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 CDC25AP30304 524 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 ZNF131P52739 623 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 NCKAP1LP55160 1127 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 TWF1Q12792 350 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 GPR17Q13304 367 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 KYAT1Q16773 422 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 CYP4A22Q5TCH4 519 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 IQCEQ6IPM2 695 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 C1orf228Q6PIY5 440 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 DTHD1Q6ZMT9 781 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 MFSD6LQ8IWD5 586 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 ATRIPQ8WXE1 791 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 MKNK1Q9BUB5 465 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 GPR88Q9GZN0 384 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 BRD9Q9H8M2 597 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 ASAH2Q9NR71 780 aa9.15□□□□□ -0.94
PALB2-202ENST00000561514 UBQLN1Q9UMX0 589 aaKnown RBP9.15□□□□□ -0.94
PALB2-202ENST00000561514 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms