RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TNFSF9P41273 254 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 PRKCIP41743 596 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 STAT1P42224 750 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ARHGAP25P42331 645 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 KIF11P52732 1056 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ERVK-21P61565 698 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 WDR5P61964 334 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 KRT83P78385 493 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 KLHL30Q0D2K2 578 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 DRAP1Q14919 205 aaPredicted RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 KIZQ2M2Z5 673 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZACNQ401N2 412 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 TDRD12Q587J7 1177 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 LMBRD2Q68DH5 695 aaPredicted RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZNF662Q6ZS27 426 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ARHGEF19Q8IW93 802 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ADHFE1Q8IWW8 467 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 C7orf31Q8N865 590 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ATRIPQ8WXE1 791 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 SCLT1Q96NL6 688 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 TGS1Q96RS0 853 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 PRRX2Q99811 253 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 TCHPQ9BT92 498 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 ZBED2Q9BTP6 218 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 DEF6Q9H4E7 631 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 PDE11AQ9HCR9 933 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 HDAC6Q9UBN7 1215 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 MUTYHQ9UIF7 546 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 CPSF3Q9UKF6 684 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 FAM50BQ9Y247 325 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 BZW2Q9Y6E2 419 aaKnown RBP8.1□□□□□ -1.11
TPM1-231ENST00000561395 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
TPM1-231ENST00000561395 CITO14578 2027 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 LINC01553A4QN01 128 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 AKR1B10O60218 316 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ZC3H11AO75152 810 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM1-231ENST00000561395 LRRN2O75325 713 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 CSDE1O75534 798 aaKnown RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 GFPT2O94808 682 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ERLIN2O94905 339 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 VNN1O95497 513 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 C4BPAP04003 597 aaKnown RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 PNMA6AP0CW24 399 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 C7P10643 843 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 DARSP14868 501 aaKnown RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 ARF4P18085 180 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 TNNI1P19237 187 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 PIK3CAP42336 1068 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 VAV2P52735 878 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 AP3M2P53677 418 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ETF1P62495 437 aaKnown RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 DEFB103AP81534 67 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ZNF200P98182 395 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 ARID5AQ03989 594 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 PCBP1Q15365 356 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM1-231ENST00000561395 SURF1Q15526 300 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ENOX2Q16206 610 aaKnown RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 KYAT1Q16773 422 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 ZNF571Q7Z3V5 609 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 WDR49Q8IV35 697 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 DNAJB3Q8WWF6 145 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 CPB2Q96IY4 423 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 GCOM2Q9BZD3 368 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 HAUS4Q9H6D7 363 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 UBE2TQ9NPD8 197 aaPredicted RBP8.09□□□□□ -1.11
TPM1-231ENST00000561395 LZTFL1Q9NQ48 299 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 RAB20Q9NX57 234 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
TPM1-231ENST00000561395 PDCD11Q14690 1871 aaKnown RBP8.09□□□□□ -1.12
TPM1-231ENST00000561395 KIF5CO60282 957 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 IL18RAPO95256 599 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 GJB5O95377 273 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 HLA-DRAP01903 254 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 CLTAP09496 248 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 CCDC172P0C7W6 258 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 MFAP3P55082 362 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 POU5F1Q01860 360 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 CYP27A1Q02318 531 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 PTK2Q05397 1052 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 BIRC3Q13489 604 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 SPA17Q15506 151 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 SLC18A3Q16572 532 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 ARHGAP44Q17R89 818 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 NBPF20Q3BBV1 942 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 DCAF4L1Q3SXM0 396 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms