RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CATSPERZQ9NTU4 200 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
SPG11-225ENST00000561391 ANKFY1Q9P2R3 1169 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 NCDNQ9UBB6 729 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 RCAN3Q9UKA8 241 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 FAM184BQ9ULE4 1060 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 MAP3K2Q9Y2U5 619 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 COQ6Q9Y2Z9 468 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 SIT1Q9Y3P8 196 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 MAST3O60307 1309 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 TNKSO95271 1327 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 NAV2Q8IVL1 2488 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 ASPMQ8IZT6 3477 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 DOCK1Q14185 1865 aa3.86□□□□□ -1.79
SPG11-225ENST00000561391 CEP250Q9BV73 2442 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 FRYLO94915 3013 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 A0A1B0GUL6 1792 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 LOC285556D6RIA3 1793 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 TCRBV16S1A1N1A0A5B0 115 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CCDC66A2RUB6 948 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 EIF4E1BA6NMX2 242 aaKnown RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 SRRM3A6NNA2 597 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 FAM47E-STBD1D6RA91 191 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 H3BNC9 293 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 H7BY64 318 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 DUSP11O75319 330 aaKnown RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 TBX10O75333 385 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 DGKIO75912 1065 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 DNAJC8O75937 253 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 MPOP05164 745 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 IGKV5-2P06315 115 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 PGK2P07205 417 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 JMJD7P0C870 316 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 PYGMP11217 842 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 GNAT1P11488 350 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 MYCLP1P12525 358 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 NAT1P18440 290 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 KRT15P19012 456 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 NDUFV1P49821 464 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 WDR5P61964 334 aaKnown RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 PSMC6P62333 389 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 DEFB103AP81534 67 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 IFIT5Q13325 482 aaKnown RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 UBE4AQ14139 1066 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 ZNF460Q14592 562 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 RAB3GAP1Q15042 981 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 SHROOM1Q2M3G4 852 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 EPC2Q52LR7 807 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CAVIN4Q5BKX8 364 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CATSPERGQ6ZRH7 1159 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 FAM129CQ86XR2 697 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 WDR63Q8IWG1 891 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CCDC105Q8IYK2 499 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 LINC01356Q8N9X3 169 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 PCDH19Q8TAB3 1148 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 MZB1Q8WU39 189 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 MTA3Q9BTC8 594 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 PHF7Q9BWX1 381 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 IDI2Q9BXS1 227 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CNTD2Q9H8S5 307 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 SPC25Q9HBM1 224 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CRTAC1Q9NQ79 661 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 DDX4Q9NQI0 724 aaKnown RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 NRBP1Q9UHY1 535 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 ZHX1Q9UKY1 873 aaPredicted RBP3.85□□□□□ -1.79
SPG11-225ENST00000561391 USP18Q9UMW8 372 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 CNPY2Q9Y2B0 182 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 GRIN2DO15399 1336 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 RALGAPA2Q2PPJ7 1873 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 SCN5AQ14524 2016 aa3.85□□□□□ -1.79
SPG11-225ENST00000561391 RFPL3O75679 317 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 KRT38O76015 456 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 GJB5O95377 273 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 EYA4O95677 639 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 ASLP04424 464 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 CT47B1P0C2W7 299 aaPredicted RBP3.84□□□□□ -1.79
SPG11-225ENST00000561391 IQCF3P0C7M6 154 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 GLI4P10075 376 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 FCER1AP12319 257 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 NCLP19338 710 aaKnown RBP3.84□□□□□ -1.79
SPG11-225ENST00000561391 PMLP29590 882 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 IGFALSP35858 605 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 FLT3P36888 993 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 CDR1P51861 262 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 ADAM15Q13444 863 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 GCKRQ14397 625 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 FAM47CQ5HY64 1035 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 UBXN11Q5T124 520 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 PIK3R6Q5UE93 754 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 WWC2Q6AWC2 1192 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 C19orf48Q6RUI8 117 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 UNQ6494/PRO21346Q6UXR6 183 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 UBE2R2Q712K3 238 aaPredicted RBP3.84□□□□□ -1.79
SPG11-225ENST00000561391 NOL8Q76FK4 1167 aaKnown RBP3.84□□□□□ -1.79
SPG11-225ENST00000561391 MILR1Q7Z6M3 343 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 FILIP1Q7Z7B0 1213 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 LRRTM3Q86VH5 581 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 OSTM1Q86WC4 334 aa3.84□□□□□ -1.79
SPG11-225ENST00000561391 RBM12BQ8IXT5 1001 aaKnown RBP3.84□□□□□ -1.79
SPG11-225ENST00000561391 UBR7Q8N806 425 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms