RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ARHGEF37A1IGU5 675 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 CUTAO60888 179 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 LRG1P02750 347 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 CFHP08603 1231 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 ATF2P15336 505 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 ELF1P32519 619 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 YWHAHQ04917 246 aaPredicted RBP18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 C9orf57Q5W0N0 161 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 CWF19L1Q69YN2 538 aaKnown RBP18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 CRELD2Q6UXH1 353 aaPredicted RBP18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 DSTYKQ6XUX3 929 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZSWIM2Q8NEG5 633 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 FGF13Q92913 245 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 SAAL1Q96ER3 474 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 TSPAN18Q96SJ8 248 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 TNMDQ9H2S6 317 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 EXOC7Q9UPT5 735 aa18.65■□□□□ 0.58
CDC42BPB-208ENST00000561271 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 ANHXE9PGG2 379 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 SPTLC1O15269 473 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 OR4Q2P0C623 313 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 WNT7BP56706 349 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 ADCY1Q08828 1119 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 SLC5A9Q2M3M2 681 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 RTL10Q7L3V2 364 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 USP37Q86T82 979 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 NPAS3Q8IXF0 933 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 TCEAL8Q8IYN2 117 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 SYCP3Q8IZU3 236 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 SIX5Q8N196 739 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 SLC44A3Q8N4M1 653 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 TMEM105Q8N8V8 129 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 GLIS3Q8NEA6 775 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 FLCNQ8NFG4 579 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 FGF14Q92915 247 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 ASB7Q9H672 318 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 DERAQ9Y315 318 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
CDC42BPB-208ENST00000561271 HELZP42694 1942 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 PRPF6O94906 941 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 RHOP08100 348 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 SRFP11831 508 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 ODC1P11926 461 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 LILRA4P59901 499 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 TCF15Q12870 199 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 ALCAMQ13740 583 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 POSTNQ15063 836 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 PARM1Q6UWI2 310 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 RNF19BQ6ZMZ0 732 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 SENP8Q96LD8 212 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 PGLYRP2Q96PD5 576 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 FAM213AQ9BRX8 229 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 TRIM9Q9C026 710 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 KBTBD4Q9NVX7 518 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 AFF4Q9UHB7 1163 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 MRPS23Q9Y3D9 190 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 PCDHB13Q9Y5F0 798 aa18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 ZFP37Q9Y6Q3 630 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-208ENST00000561271 ANO9A1A5B4 782 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 PIRO00625 290 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 OAZ2O95190 189 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 VNN2O95498 520 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 CEBPBP17676 345 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 ASIC1P78348 528 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 DNM1Q05193 864 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 OVOS1Q6IE37 1185 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 BRSK2Q8IWQ3 736 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 KCNG4Q8TDN1 519 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 NXPE3Q969Y0 559 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 FAM84AQ96KN4 292 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 KXD1Q9BQD3 176 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 CORO1BQ9BR76 489 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 CBWD1Q9BRT8 395 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 RPP25Q9BUL9 199 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 CUEDC2Q9H467 287 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 DPP3Q9NY33 737 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 KCNH3Q9ULD8 1083 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 CA14Q9ULX7 337 aa18.62■□□□□ 0.57
CDC42BPB-208ENST00000561271 GOLGA8IPA6NC78 632 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 GOLGA8JA6NMD2 632 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 IL18RAPO95256 599 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 TYMPP19971 482 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 ME1P48163 572 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 PTPN5P54829 565 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 TWF1Q12792 350 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 ASTLQ6HA08 431 aaPredicted RBP18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 IQUBQ8NA54 791 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 GPR152Q8TDT2 470 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 PRRX2Q99811 253 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 PCDHA7Q9UN72 937 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 YIPF1Q9Y548 306 aa18.61■□□□□ 0.57
CDC42BPB-208ENST00000561271 F5P12259 2224 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms