RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
LDLR-212ENST00000560467 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 CMASQ8NFW8 434 aaPredicted RBP12.77□□□□□ -0.37
LDLR-212ENST00000560467 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 POMGNT1Q8WZA1 660 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 MYADMQ96S97 322 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 STRA6Q9BX79 667 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
LDLR-212ENST00000560467 RNF39Q9H2S5 420 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 AGPAT3Q9NRZ7 376 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 IGSF9Q9P2J2 1179 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 CLUHO75153 1309 aa12.77□□□□□ -0.37
LDLR-212ENST00000560467 CCDC195A0A1B0GUA6 201 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 STK25O00506 426 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ACKR2O00590 384 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 N4BP3O15049 544 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 INPPL1O15357 1258 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 CLDN3O15551 220 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 STX10O60499 249 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 PPP1R37O75864 691 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 GLUD1P00367 558 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 PRKCBP05771 671 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ADH1AP07327 375 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 SPATA31D3P0C874 917 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 GARTP22102 1010 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 MLH1P40692 756 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 OR1G1P47890 313 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ID4P47928 161 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 GLUD2P49448 558 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 CYP2J2P51589 502 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 FANCCQ00597 558 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 NCAPHQ15003 741 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 KYAT1Q16773 422 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 CDCA2Q69YH5 1023 aaPredicted RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 SARM1Q6SZW1 724 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 SPATA31D4Q6ZUB0 917 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 XXYLT1Q8NBI6 393 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 SMG7Q92540 1137 aaKnown RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 KCNN1Q92952 543 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ZNF707Q96C28 371 aaPredicted RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 GAD1Q99259 594 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 MKNK1Q9BUB5 465 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 WDR6Q9NNW5 1121 aaKnown RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 SAMSN1Q9NSI8 373 aaKnown RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 KANSL3Q9P2N6 904 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
LDLR-212ENST00000560467 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 HES2Q9Y543 173 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 IPPQ9Y573 584 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 DCHS1Q96JQ0 3298 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
LDLR-212ENST00000560467 ARL5CA6NH57 179 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 TSPAN1O60635 241 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 TOM1L1O75674 476 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 EFEMP2O95967 443 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 TPM1P09493 284 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 ITGA4P13612 1032 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 RFX1P22670 979 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 SCNN1GP51170 649 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 DSC1Q08554 894 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 CETN1Q12798 172 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 CDKAL1Q5VV42 579 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 KIAA0319Q5VV43 1072 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 C12orf56Q8IXR9 622 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
LDLR-212ENST00000560467 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
LDLR-212ENST00000560467 CPB2Q96IY4 423 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 ZFP42Q96MM3 310 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
LDLR-212ENST00000560467 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 TBC1D17Q9HA65 648 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 MIOSQ9NXC5 875 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 EPS15L1Q9UBC2 864 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.75□□□□□ -0.37
LDLR-212ENST00000560467 R4GN57 208 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
LDLR-212ENST00000560467 CLIC2O15247 247 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 ADCY5O95622 1261 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
LDLR-212ENST00000560467 ZNF18P17022 549 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
LDLR-212ENST00000560467 AXLP30530 894 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 PMS1P54277 932 aaKnown RBP12.74□□□□□ -0.37
LDLR-212ENST00000560467 DSG1Q02413 1049 aa12.74□□□□□ -0.37
LDLR-212ENST00000560467 KCNA1Q09470 495 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms