RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RAB33AQ14088 237 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 MRPL58Q14197 206 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 LIN9Q5TKA1 542 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 RTL10Q7L3V2 364 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 TMEM105Q8N8V8 129 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 ADAM12O43184 909 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 NUCB2P80303 420 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 SLC8B1Q6J4K2 584 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 HPS3Q969F9 1004 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 MYADMQ96S97 322 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 SERTAD1Q9UHV2 236 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 CFAP54Q96N23 3096 aa16.46■□□□□ 0.23
SNRPA1-210ENST00000560383 ANO9A1A5B4 782 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 M0QZQ0 153 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 IL18RAPO95256 599 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 LDHAP00338 332 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 C8AP07357 584 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 NFICP08651 508 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 LAMP2P13473 410 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 PAX3P23760 479 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 CASP1P29466 404 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 CUL4BQ13620 913 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 VARS2Q5ST30 1063 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 RSPO2Q6UXX9 243 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 TMEM130Q8N3G9 435 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 BEST2Q8NFU1 509 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 CBWD1Q9BRT8 395 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 BLZF1Q9H2G9 400 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 WNT16Q9UBV4 365 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 UBE4BO95155 1302 aa16.45■□□□□ 0.22
SNRPA1-210ENST00000560383 ANHXE9PGG2 379 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 PIRO00625 290 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 KLRC4O43908 158 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 EXTL3O43909 919 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 XYLBO75191 536 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 MYL1P05976 194 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 SRFP11831 508 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 AOC1P19801 751 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 MCM4P33991 863 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 OR1D2P34982 312 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 AFMP43652 599 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 BMT2Q1RMZ1 405 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 UVSSAQ2YD98 709 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 PPM1LQ5SGD2 360 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 GET4Q7L5D6 327 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 BRSK2Q8IWQ3 736 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 ZSWIM2Q8NEG5 633 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 APPL2Q8NEU8 664 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 SCFD1Q8WVM8 642 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 FAM212AQ96EL1 285 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 FBXL21Q9UKT6 434 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 PCDHB8Q9UN66 801 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
SNRPA1-210ENST00000560383 H7C4K7 107 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 OAZ2O95190 189 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 SYKP43405 635 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 GUCY2FP51841 1108 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 NDUFA8P51970 172 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 LILRA4P59901 499 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 HTR4Q13639 388 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 SLC44A3Q8N4M1 653 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 SAAL1Q96ER3 474 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 RTP3Q9BQQ7 232 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 DOCK6Q96HP0 2047 aa16.43■□□□□ 0.22
SNRPA1-210ENST00000560383 PROB1E7EW31 1015 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 PPEF2O14830 753 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 NARSO43776 548 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 ABLIM3O94929 683 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 NPR3P17342 541 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 TYMPP19971 482 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 FSHRP23945 695 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 WNT7BP56706 349 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 ROR1Q01973 937 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 GRASPQ7Z6J2 395 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 SIX5Q8N196 739 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms