RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 TNNC2P02585 160 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 GYPCP04921 128 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 GALTP07902 379 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 UCHL3P15374 230 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 ACO1P21399 889 aaKnown RBP10.09□□□□□ -0.79
HERC1-206ENST00000559996 ATICP31939 592 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 RPL9P32969 192 aaKnown RBP10.09□□□□□ -0.79
HERC1-206ENST00000559996 BMP8BP34820 402 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FXR1P51114 621 aaKnown RBP eCLIP10.09□□□□□ -0.79
HERC1-206ENST00000559996 LILRA4P59901 499 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 ARID5BQ14865 1188 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 SGSM1Q2NKQ1 1148 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FKBP15Q5T1M5 1219 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 LRRC52Q8N7C0 313 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 BCL7CQ8WUZ0 217 aaPredicted RBP10.09□□□□□ -0.79
HERC1-206ENST00000559996 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 LBHD1Q9BQE6 289 aaPredicted RBP10.09□□□□□ -0.79
HERC1-206ENST00000559996 LSM14BQ9BX40 385 aaKnown RBP10.09□□□□□ -0.79
HERC1-206ENST00000559996 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.79
HERC1-206ENST00000559996 SLC38A7Q9NVC3 462 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FBXL5Q9UKA1 691 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 POLIQ9UNA4 740 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 NME7Q9Y5B8 376 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 FHOD1Q9Y613 1164 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 GRXCR1A8MXD5 290 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 PES1O00541 588 aaKnown RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 PODXLO00592 558 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 NRP1O14786 923 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 HOXA2O43364 376 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 ZC3H11AO75152 810 aaKnown RBP eCLIP10.08□□□□□ -0.8
HERC1-206ENST00000559996 TPM2P07951 284 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 ASPAP45381 313 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 SLC11A1P49279 550 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 JAM2P57087 298 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 GOLGA8FQ08AF8 430 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 GOLGA8DPQ0D2H9 430 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 LRMPQ12912 555 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 BIRC3Q13489 604 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 TIGD5Q53EQ6 642 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 IQCEQ6IPM2 695 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 RRAGAQ7L523 313 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 TMEM173Q86WV6 379 aaPredicted RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 HERC6Q8IVU3 1022 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 CMTR2Q8IYT2 770 aaKnown RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 RSPH1Q8WYR4 309 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 TAF4BQ92750 862 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 HPDLQ96IR7 371 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 FAXDC2Q96IV6 333 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 ARID3AQ99856 593 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 BCO2Q9BYV7 579 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 FAM207AQ9NSI2 230 aaPredicted RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 MARCH5Q9NX47 278 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 GDAP2Q9NXN4 497 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 DNAJC12Q9UKB3 198 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 CAPN11Q9UMQ6 739 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 CNTN6Q9UQ52 1028 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
HERC1-206ENST00000559996 SLC4A7Q9Y6M7 1214 aa10.08□□□□□ -0.8
HERC1-206ENST00000559996 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 LCHNA4D1U4 455 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 KPNA7A9QM74 516 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 TMEM189-UBE2V1I3L0A0 370 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 M0QZQ0 153 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 FOXN3O00409 490 aaPredicted RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 XPOTO43592 962 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 PHACTR2O75167 634 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 KIF4AO95239 1232 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 KRT19P08727 400 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 CASP14P31944 242 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 PBX3P40426 434 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 PIK3CAP42336 1068 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 BRCC3P46736 316 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 KCNJ6P48051 423 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 RABGGTBP53611 331 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 CDH8P55286 799 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 POLR2FP61218 127 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 GCNT1Q02742 428 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 TRPC3Q13507 836 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 SOWAHAQ2M3V2 549 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 WDR72Q3MJ13 1102 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 PAN2Q504Q3 1202 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 TAS1R1Q7RTX1 841 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 TMC6Q7Z403 805 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 SPRED2Q7Z698 418 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 RNF168Q8IYW5 571 aaPredicted RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 TC2NQ8N9U0 490 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms