RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 EPN3Q9H201 632 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 SMARCAD1Q9H4L7 1026 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 FAM124BQ9H5Z6 455 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-212ENST00000559937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■■■ 334.2
SMAD3-212ENST00000559937 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 ADAM22Q9P0K1 906 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 IP6K2Q9UHH9 426 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 SLC12A6Q9UHW9 1150 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 CPSF3Q9UKF6 684 aaKnown RBP8.61□□□□□ -1.03
SMAD3-212ENST00000559937 PCDHGC3Q9UN70 934 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 SNX24Q9Y343 169 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 RRP15Q9Y3B9 282 aaKnown RBP8.61□□□□□ -1.03
SMAD3-212ENST00000559937 NUB1Q9Y5A7 615 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 PDCD11Q14690 1871 aaKnown RBP8.61□□□□□ -1.03
SMAD3-212ENST00000559937 COL1A2P08123 1366 aa8.61□□□□□ -1.03
SMAD3-212ENST00000559937 UNCXA6NJT0 531 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ZBTB42B2RXF5 422 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ADM5C9JUS6 153 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 EBAG9O00559 213 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 NOP56O00567 594 aaKnown RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ACKR2O00590 384 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 NDC80O14777 642 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 B4GALT4O60513 344 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ARIH2O95376 493 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TNNC2P02585 160 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 MMP8P22894 467 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 LSP1P33241 339 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 PTPN7P35236 360 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 APLP1P51693 650 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 PLTPP55058 493 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 COPS2P61201 443 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 LMNB2Q03252 620 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 IFFO1Q0D2I5 559 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 PDCLQ13371 301 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 MOGSQ13724 837 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 BYSLQ13895 437 aaKnown RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TTLL4Q14679 1199 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 PLCB4Q15147 1175 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 CCNG2Q16589 344 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 KYAT1Q16773 422 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 FAM187BQ17R55 369 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF484Q5JVG2 852 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 LRRC38Q5VT99 294 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 SPOPLQ6IQ16 392 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TSHZ1Q6ZSZ6 1077 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 MICALCLQ6ZW33 695 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 DHX37Q8IY37 1157 aaKnown RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TMEM35BQ8NCS4 154 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 FEZF2Q8TBJ5 459 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 CPA5Q8WXQ8 436 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ANKRD36BP1Q96IX9 119 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 RBM41Q96IZ5 413 aaKnown RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ROPN1BQ9BZX4 212 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TRIM31Q9BZY9 425 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 EPB41L4BQ9H329 900 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 FZD8Q9H461 694 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ROPN1Q9HAT0 212 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-212ENST00000559937 RBPJLQ9UBG7 517 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 RSPH14Q9UHP6 348 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TNFSF13BQ9Y275 285 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 ATP8A1Q9Y2Q0 1164 aa8.6□□□□□ -1.03
SMAD3-212ENST00000559937 TMEM191CA6NGB0 347 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 MAGEB2O15479 319 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 DDNO94850 711 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 AGTP01019 485 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 HOXC6P09630 235 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 TMEM191BP0C7N4 346 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 EIF4BP23588 611 aaKnown RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 GSCP56915 257 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CORO7P57737 925 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 TNFAIP2Q03169 654 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 KRT17Q04695 432 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 KLF1Q13351 362 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 TRPC3Q13507 836 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 PIGHQ14442 188 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 PPP1R7Q15435 360 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 LY6KQ17RY6 165 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF568Q3ZCX4 644 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ZBTB41Q5SVQ8 909 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ATF7IP2Q5U623 682 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 FOXR1Q6PIV2 292 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 RHBDF2Q6PJF5 856 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ARMC9Q7Z3E5 817 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 RCOR2Q8IZ40 523 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 NIPA2Q8N8Q9 360 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms