RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP3-216ENST00000559873 LILRA4P59901 499 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 MYL7Q01449 175 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 NCOA4Q13772 614 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 KCNJ12Q14500 433 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 MAN2A1Q16706 1144 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 TDRD10Q5VZ19 366 aaKnown RBP10.84□□□□□ -0.67
USP3-216ENST00000559873 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 LRSAM1Q6UWE0 723 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 METTL23Q86XA0 190 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 RNF168Q8IYW5 571 aaPredicted RBP10.84□□□□□ -0.67
USP3-216ENST00000559873 FBXL13Q8NEE6 735 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 SPATA18Q8TC71 538 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 BCL7CQ8WUZ0 217 aaPredicted RBP10.84□□□□□ -0.67
USP3-216ENST00000559873 RABGGTAQ92696 567 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 HPDLQ96IR7 371 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
USP3-216ENST00000559873 DNAI2Q9GZS0 605 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 GZF1Q9H116 711 aaPredicted RBP10.84□□□□□ -0.67
USP3-216ENST00000559873 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 SIX4Q9UIU6 781 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
USP3-216ENST00000559873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.83□□□□□ -0.68
USP3-216ENST00000559873 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 F8W810 466 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 H7C4K7 107 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 M0QZQ0 153 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 PPEF2O14830 753 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 FSCN2O14926 492 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 HLA-DRAP01903 254 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 SRGAP2BP0DMP2 458 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 TRIM21P19474 475 aaKnown RBP10.83□□□□□ -0.68
USP3-216ENST00000559873 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
USP3-216ENST00000559873 FGFR3P22607 806 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 BRCC3P46736 316 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 FMO5P49326 533 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 DSG1Q02413 1049 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 YWHAHQ04917 246 aaPredicted RBP10.83□□□□□ -0.68
USP3-216ENST00000559873 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 PTPN14Q15678 1187 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 ZNF667Q5HYK9 610 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 C1orf220Q5T0J3 134 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 CDKAL1Q5VV42 579 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 PLPP4Q5VZY2 271 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 ANKS3Q6ZW76 656 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 CEP57Q86XR8 500 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 TOP6BLQ8N6T0 577 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 SENP8Q96LD8 212 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 MED15Q96RN5 788 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 NSUN3Q9H649 340 aaKnown RBP10.83□□□□□ -0.68
USP3-216ENST00000559873 IRAK3Q9Y616 596 aa10.83□□□□□ -0.68
USP3-216ENST00000559873 GTPBP10A4D1E9 387 aaKnown RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 I3L4J1 428 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 PES1O00541 588 aaKnown RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 CYB561D2O14569 222 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 PMM2O15305 246 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 CSPG5O95196 566 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 EFEMP2O95967 443 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 ASS1P00966 412 aaKnown RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 ADH1AP07327 375 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 POU3F3P20264 500 aaPredicted RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 IGFBP4P22692 258 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 ZNF445P59923 1031 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 MYL6P60660 151 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 NOP14P78316 857 aaKnown RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 KCNH2Q12809 1159 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 PSMD5Q16401 504 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 TCP11X2Q5H9J9 407 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 RTP2Q5QGT7 225 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 FKBP15Q5T1M5 1219 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 OVOS1Q6IE37 1185 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 Q7L0L9 218 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 PPFIBP1Q86W92 1011 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 CXorf38Q8TB03 319 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 TAS1R2Q8TE23 839 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 RIN2Q8WYP3 895 aaPredicted RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 ZNF516Q92618 1163 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 FAXDC2Q96IV6 333 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 FAM84AQ96KN4 292 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 MMS19Q96T76 1030 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
USP3-216ENST00000559873 TUBGCP2Q9BSJ2 902 aa10.82□□□□□ -0.68
USP3-216ENST00000559873 VN1R3Q9BXE9 311 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms