RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 DDX12PQ92771 950 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 SMARCD2Q92925 531 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 KMT5AQ9NQR1 393 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 AFF4Q9UHB7 1163 aaKnown RBP12.12□□□□□ -0.47
HERC1-204ENST00000559715 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
HERC1-204ENST00000559715 OBSL1O75147 1896 aa12.12□□□□□ -0.47
HERC1-204ENST00000559715 PRRG1O14668 218 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 TOM1L1O75674 476 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 LRG1P02750 347 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 LRPAP1P30533 357 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 PRPHP41219 470 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
HERC1-204ENST00000559715 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
HERC1-204ENST00000559715 SLC12A3P55017 1021 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 ARPP19P56211 112 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 MCL1Q07820 350 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 CTXN3Q4LDR2 81 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
HERC1-204ENST00000559715 ZFP14Q9HCL3 533 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 C2orf42Q9NWW7 574 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
HERC1-204ENST00000559715 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
HERC1-204ENST00000559715 AKAP13Q12802 2813 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 H7C4K7 107 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 ZNF197O14709 1029 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 PPEF2O14830 753 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 OR4Q2P0C623 313 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 CXCL8P10145 99 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 PSMC3P17980 439 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 GDI1P31150 447 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 ELF1P32519 619 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 TNFSF9P41273 254 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
HERC1-204ENST00000559715 SPAG1Q07617 926 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 TWF1Q12792 350 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
HERC1-204ENST00000559715 TEAD2Q15562 447 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 ZPBP2Q6X784 338 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 MFSD6LQ8IWD5 586 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 SYT2Q8N9I0 419 aaPredicted RBP12.1□□□□□ -0.47
HERC1-204ENST00000559715 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 FAM126AQ9BYI3 521 aaPredicted RBP12.1□□□□□ -0.47
HERC1-204ENST00000559715 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
HERC1-204ENST00000559715 SPEGQ15772 3267 aa12.1□□□□□ -0.47
HERC1-204ENST00000559715 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 NCAM2O15394 837 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 PLS3P13797 630 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 ATP2C1P98194 919 aaPredicted RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 DMWDQ09019 674 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 RAD51AP2Q09MP3 1159 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
HERC1-204ENST00000559715 ENOX2Q16206 610 aaKnown RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 ZNF280DQ6N043 979 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 TXNDC11Q6PKC3 985 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 GAREM2Q75VX8 874 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 IRF7Q92985 503 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 NDRG2Q9UN36 371 aaKnown RBP12.09□□□□□ -0.47
HERC1-204ENST00000559715 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 PIAS3Q9Y6X2 628 aa12.09□□□□□ -0.47
HERC1-204ENST00000559715 TCHHQ07283 1943 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 GREB1Q4ZG55 1949 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 LACTBL1A8MY62 500 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 K7ESF4 209 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 LAD1O00515 517 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 HRO43593 1189 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
HERC1-204ENST00000559715 MYL4P12829 197 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 MCM4P33991 863 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 SATB1Q01826 763 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 DUSP4Q13115 394 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 GPR17Q13304 367 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 KRT79Q5XKE5 535 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
HERC1-204ENST00000559715 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms